INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OL800605	Salmonella phage vB_SAg-RPN15	38505	50.425	Salmonella	Group I	Teetrevirus	Teetrevirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica serovar Agona strain CBn15	High-quality	High-quality	96.470	AAI-based (high-confidence)	Teetrevirus	Teetrevirus RPN15	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL800606	Salmonella phage vB_SAg-RPN213	86124	38.719	Salmonella	Group I	Felixounavirus	Felixounavirus	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica serovar Agona strain Pco213	High-quality	High-quality	97.830	AAI-based (high-confidence)	Felixounavirus	Felixounavirus RPN213	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL800706	Escherichia phage CLB_P3	49689	45.889	Escherichia	Group I	Tunavirus	Tunavirus	Tunavirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli EAEC strain (55989Str)	High-quality	High-quality	99.210	AAI-based (high-confidence)	Tunavirus	Tunavirus CLBP3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL828290	Enterobacter phage vB-EclM_KMB19	172697	39.792	Enterobacter	Group I	Karamvirus	Karamvirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae KMB536	High-quality	High-quality	100.000	AAI-based (high-confidence)	Karamvirus	Karamvirus petcm34	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL828291	Enterobacter phage vB-EclM_KMB20	174428	39.718	Enterobacter	Group I	Karamvirus	Karamvirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae KMB220	High-quality	High-quality	100.000	AAI-based (high-confidence)	Karamvirus	Karamvirus KMB20	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL829977	Gordonia phage Amok	45278	61.087	Gordonia	Group I	Emalynvirus	Emalynvirus	Ceeteevirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia rubripertincta NRRL B-16540	High-quality	High-quality	97.780	AAI-based (high-confidence)	Emalynvirus	Emalynvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL829978	Streptomyces phage Tomas	134464	48.171	Streptomyces	Group I	Tomasvirus	Tomasvirus	Boydwoodruffvirinae	Stanwilliamsviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces sanglieri UNT16F27A	Complete	High-quality	100.000	DTR (high-confidence)	Tomasvirus	Tomasvirus tomas	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_119
OL840290	Staphylococcus phage Rih21	44789	33.258	Staphylococcus	Group I	Triavirus	Triavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus	High-quality	High-quality	96.460	AAI-based (high-confidence)	Triavirus	Triavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_8;integrase orf_38
OL840900	Aeromonas phage AhMtk13a	163879	41.207	Aeromonas	Group I	Tulanevirus	Tulanevirus	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas hydrophila GW3-10	High-quality	High-quality	96.860	AAI-based (high-confidence)	Tulanevirus	Tulanevirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL840901	Aeromonas phage AhMtk13b	61446	62.069	Aeromonas	Group I	Sharonstreetvirus	Sharonstreetvirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas hydrophila GW3-10	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sharonstreetvirus	Sharonstreetvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic