INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OL770263	Acinetobacter phage AbTP3phi1	42093	39.137	Acinetobacter	Group I	Friunavirus	Friunavirus	Beijerinckvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii	High-quality	High-quality	100.000	AAI-based (high-confidence)	Friunavirus	Friunavirus AbTP31	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL770276	Salmonella phage vB_SalS-S10	43324	49.481	Salmonella	Group I	Jerseyvirus	Jerseyvirus	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	Jerseyvirus	Jerseyvirus S10	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL770278	Escherichia phage vB_EcoD_Opt212	44488	54.412	Escherichia	Group I	Dhillonvirus	Dhillonvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	99.490	AAI-based (high-confidence)	Dhillonvirus	Dhillonvirus opt212	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL770309	Erwinia phage Virsaitis27	171269	38.796	Erwinia	Group I	Winklervirus	Winklervirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia rhapontici	High-quality	High-quality	98.610	AAI-based (high-confidence)	Winklervirus	Winklervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL770310	Escherichia phage PSa2	110539	39.885	Escherichia	Group I	Epseptimavirus	Epseptimavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacteriaceae	High-quality	High-quality	97.710	AAI-based (high-confidence)	Epseptimavirus	Epseptimavirus EPS7	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OL773676	Salmonella phage PRF-SP4	39829	50.298	Salmonella	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Paratyphi B	Complete	High-quality	100.000	DTR (high-confidence)	Kayfunavirus	Kayfunavirus PRFSP1	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OL773677	Salmonella phage PRF-SP5	39849	50.297	Salmonella	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Paratyphi B	Complete	High-quality	100.000	DTR (high-confidence)	Kayfunavirus	Kayfunavirus PRFSP1	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OL774570	Aeromonas phage phiA008	65284	52.901	Aeromonas	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OL774867	Streptococcus phage MismyG	42739	39.650	Streptococcus	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus mitis	High-quality	High-quality	99.900	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	antirepressor orf_31;integrase orf_70
OL774868	Streptococcus phage OlisA1	30210	39.844	Streptococcus	Group I	Phadecavirus	Phadecavirus	Mcshanvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus oralis	High-quality	High-quality	91.510	AAI-based (high-confidence)	Phadecavirus	Phadecavirus olisA1	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1;cro orf_4;integrase orf_28