INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OK913680	Xanthomonas phage MET23-P3	43010	66.743	Xanthomonas	Group I	Tabiovirus	Tabiovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	99.190	AAI-based (high-confidence)	Tabiovirus	Tabiovirus MET23P3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OK999978	Mycobacterium phage Grub	50841	64.033	Mycobacterium	Group I	Microwolfvirus	Microwolfvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Microwolfvirus	Microwolfvirus microwolf	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_32
OK999979	Microbacterium phage Franklin22	40567	66.096	Microbacterium	Group I	Armstrongvirus	Armstrongvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium testaceum NRRL B-24232	High-quality	High-quality	98.530	AAI-based (high-confidence)	Edenvirus	Edenvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OK999980	Arthrobacter phage EastWest	50397	61.541	Arthrobacter	Group I	Eastwestvirus	Eastwestvirus	Unclassified	Berryhillviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter globiformis B-2979	High-quality	High-quality	100.000	AAI-based (high-confidence)	Eastwestvirus	Eastwestvirus eastwest	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OK999981	Microbacterium phage Skylord	39843	67.088	Microbacterium	Group I	Armstrongvirus	Armstrongvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224	High-quality	High-quality	96.420	AAI-based (high-confidence)	Armstrongvirus	Armstrongvirus armstrong	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OL310488	Escherichia phage EC101	167718	35.398	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	99.760	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus ecombl75	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL314400	Vibrio phage OTA22	76234	48.764	Vibrio	Group I	Mardecavirus	Mardecavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio campbellii HY01	Complete	High-quality	100.000	DTR (high-confidence)	Mardecavirus	Mardecavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OL333533	Bacillus phage B13S	155767	35.658	Bacillus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Bacillus cereus NCCP 11313	High-quality	High-quality	97.660	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OL343755	Pseudomonas phage BHU-1	91108	51.925	Pseudomonas	Group I	Samunavirus	Samunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	High-quality	High-quality	97.760	AAI-based (high-confidence)	Samunavirus	Samunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_87
OL348188	Aeromonas phage vB_AsaM_LPM4	37312	58.134	Aeromonas	Group I	Piscesmortuivirus	Piscesmortuivirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas salmonicida	High-quality	High-quality	100.000	AAI-based (high-confidence)	Piscesmortuivirus	Piscesmortuivirus LPM4	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_52