Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OK172329Alcaligenes phage vB_Af_QDWS5355012147.962AlcaligenesGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Alcaligenes faecalis 10106High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OK173051Streptococcus phage SF394125739.877StreptococcusGroup I SpinunavirusSpinunavirusFerrettivirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniaeHigh-qualityHigh-quality98.610AAI-based (high-confidence) SpinunavirusSpinunavirus SF39Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_55;integrase orf_59
OK181169Vibrio phage 5361267641.464VibrioGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticusLow-qualityGenome-fragment14.130AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OK210074Enterobacter phage KKP_32633941851.142EnterobacterGroup I KayfunavirusKayfunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter ludwigii KKP 3083High-qualityHigh-quality99.090AAI-based (high-confidence) KayfunavirusKayfunavirus KKP3263The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OK210077Serratia phage KKP_326414818237.509SerratiaGroup I JustusliebigvirusJustusliebigvirusStephanstirmvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Serratia fonticola KKP3084High-qualityHigh-quality98.040AAI-based (high-confidence) JustusliebigvirusJustusliebigvirus KKP3264Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OK216879Gordonia phage AnarQue6182268.806GordoniaGroup I WestmeadvirusWestmeadvirusSantaclaravirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia rubripertincta NRRL B-16540High-qualityHigh-quality100.000AAI-based (high-confidence) MossrosevirusMossrosevirus mossroseThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OK247671Clostridium phage vB_CpeS_BG3P4852828.398ClostridiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Clostridium perfringensCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OK254197Escherichia phage PNJ190210750638.996EscherichiaGroup I TequintavirusTequintavirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality95.130AAI-based (high-confidence) TequintavirusTequintavirus PNJ1902The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OK254198Escherichia phage PSD200117217540.287EscherichiaGroup I GaprivervirusGaprivervirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) GaprivervirusGaprivervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OK258138Xanthomonas phage MUD8-T14432261.620XanthomonasGroup I PradovirusPradovirusGujervirinaeAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas sp.High-qualityHigh-quality99.620AAI-based (high-confidence) PradovirusPradovirus MUD8T1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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