INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_104808 | Shigella phage SFP17 | 51296 | 44.101 | Shigella | Group I | Hanrivervirus | Hanrivervirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Shigella flexneri KCTC 22192 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_104811 | Enterococcus phage MDA2 | 140226 | 35.844 | Enterococcus | Group I | Kochikohdavirus | Kochikohdavirus | Brockvirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecium | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_104812 | Klebsiella phage B1 | 50040 | 50.408 | Klebsiella | Group I | Webervirus | Webervirus | Unclassified | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae 52145 serotype K2 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Webervirus | Webervirus B1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| NC_104876 | Escherichia phage ULINTec2 | 40815 | 51.114 | Escherichia | Group I | Kagunavirus | Kagunavirus | Guernseyvirinae | Sarkviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli APEC 45 | High-quality | High-quality | 94.920 | AAI-based (high-confidence) | lytic | ||||
| NC_104949 | Vibrio phage vB_Vipa10 | 9318 | 45.031 | Vibrio | Group II | Versovirus | Versovirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Vibrio parahaemolyticus MEVP-10 | High-quality | High-quality | 98.760 | AAI-based (high-confidence) | lytic | ||||
| NC_104950 | Vibrio phage vB_Vipa26 | 10893 | 44.350 | Vibrio | Group II | Versovirus | Versovirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Vibrio parahaemolyticus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_104951 | Vibrio phage vB_Vipa36 | 9721 | 44.748 | Vibrio | Group II | Versovirus | Versovirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Vibrio parahaemolyticus strain MAVP-36 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_104952 | Vibrio phage vB_Vipa4291 | 9663 | 45.007 | Vibrio | Group II | Versovirus | Versovirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Vibrio parahaemolyticus strain CT4291 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_104953 | Vibrio phage vB_VipaK | 10809 | 44.028 | Vibrio | Group II | Versovirus | Versovirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Vibrio parahaemolyticus strain MAVP-K | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_105100 | Escherichia phage KarlJaspers | 51474 | 43.956 | Escherichia | Group I | Hanrivervirus | Hanrivervirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli K-12 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic |