INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_070682 | Streptococcus phage CHPC950 | 35299 | 39.015 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus | High-quality | High-quality | 95.170 | AAI-based (high-confidence) | temperate | antirepressor orf_25;cro orf_26 | |||
| NC_070683 | Streptococcus phage CHPC979 | 34277 | 38.685 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus | High-quality | High-quality | 92.510 | AAI-based (high-confidence) | temperate | antirepressor orf_25;cro orf_26 | |||
| NC_070684 | Streptococcus phage D1024 | 37757 | 38.144 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus DGCC7854 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_29;cro orf_31 | |||
| NC_070685 | Streptococcus phage D1811 | 34083 | 39.025 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus DGCC7854 | High-quality | High-quality | 91.770 | AAI-based (high-confidence) | temperate | cro orf_26;cro orf_28 | |||
| NC_070686 | Streptococcus phage D4276 | 39707 | 38.036 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus DGCC7854 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | antirepressor orf_35;cro orf_36 | |||
| NC_070687 | Streptococcus phage L5A1 | 36884 | 38.860 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus | High-quality | High-quality | 99.660 | AAI-based (high-confidence) | temperate | cro orf_24;antirepressor orf_25 | |||
| NC_070688 | Streptococcus phage M19 | 34328 | 38.866 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus | High-quality | High-quality | 92.630 | AAI-based (high-confidence) | temperate | cro orf_22;antirepressor orf_23 | |||
| NC_070689 | Streptococcus phage MM25 | 34059 | 38.976 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus | High-quality | High-quality | 91.990 | AAI-based (high-confidence) | temperate | cro orf_25 | |||
| NC_070690 | Streptococcus phage P0091 | 35653 | 39.203 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST67009 | High-quality | High-quality | 96.100 | AAI-based (high-confidence) | temperate | cro orf_24 | |||
| NC_070691 | Streptococcus phage P3681 | 36168 | 38.412 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST67368 | High-quality | High-quality | 98.640 | AAI-based (high-confidence) | temperate | cro orf_28 |