INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_055838 | Xanthomonas phage FoX5 | 43872 | 59.466 | Xanthomonas | Group I | Foxunavirus | Foxunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xanthomonas campestris pv. campestris GBBC 1419 | High-quality | High-quality | 99.800 | AAI-based (high-confidence) | lytic | ||||
| NC_055839 | Xanthomonas phage FoX4 | 60418 | 61.758 | Xanthomonas | Group I | Foxquatrovirus | Foxquatrovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xanthomonas campestris pv. campestris GBBC 1412 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_055840 | Agrobacterium phage OLIVR1 | 75576 | 45.389 | Agrobacterium | Group I | Oliverunavirus | Oliverunavirus | Unclassified | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhizogenic Agrobacterium biovar 1 ST15.13/040 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_055841 | Agrobacterium phage OLIVR5 | 151073 | 46.936 | Agrobacterium | Group I | Heverleevirus | Heverleevirus | Unclassified | Pootjesviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhizogenic Agrobacterium biovar 1 ST15.13/095 | High-quality | High-quality | 99.690 | AAI-based (high-confidence) | lytic | ||||
| NC_055842 | Streptomyces phage Bmoc | 132885 | 49.639 | Streptomyces | Group I | Samistivirus | Samistivirus | Boydwoodruffvirinae | Stanwilliamsviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces griseofuscus ATCC 23916 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_055843 | Gordonia phage Evamon | 58460 | 67.805 | Gordonia | Group I | Wizardvirus | Wizardvirus | Frickvirinae | Stackebrandtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 98.560 | AAI-based (high-confidence) | temperate | immunity orf_21;integrase orf_43;integrase orf_46 | |||
| NC_055844 | Yersinia phage vB_YpM_22 | 31809 | 51.467 | Yersinia | Group I | Peduovirus | Peduovirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia pestis EV76-CN | High-quality | High-quality | 99.470 | AAI-based (high-confidence) | temperate | integrase orf_33;immunity orf_34 | |||
| NC_055845 | Yersinia phage vB_YpM_46 | 32336 | 51.661 | Yersinia | Group I | Peduovirus | Peduovirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia pestis EV76-CN | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_30 | |||
| NC_055846 | Yersinia phage vB_YpM_50 | 31096 | 52.126 | Yersinia | Group I | Peduovirus | Peduovirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia pestis EV76-CN | High-quality | High-quality | 97.220 | AAI-based (high-confidence) | temperate | integrase orf_32 | |||
| NC_055847 | Vibrio phage River4 | 128425 | 40.233 | Vibrio | Group I | Thalassavirus | Thalassavirus | Ermolyevavirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio harveyi BAA-1116 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |