INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_054645 | Salmonella phage LPST10 | 47657 | 45.532 | Salmonella | Group I | Skatevirus | Skatevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica serovar Typhimurium ATCC 14028 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_054646 | Salmonella phage VB_StyS_BS5 | 47604 | 45.526 | Salmonella | Group I | Skatevirus | Skatevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_054647 | Salmonella phage Akira | 45367 | 46.022 | Salmonella | Group I | Akiravirus | Akiravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica servar Enteritidis PT1 | High-quality | High-quality | 96.870 | AAI-based (high-confidence) | lytic | ||||
| NC_054648 | Salmonella phage vB_Se_STGO-35-1 | 47483 | 46.488 | Salmonella | Group I | Caminolopintovirus | Caminolopintovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_054649 | Escherichia phage vB_EcoS_swi2 | 47611 | 46.254 | Escherichia | Group I | Swiduovirus | Swiduovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_054650 | Shigella phage DS8 | 44605 | 46.517 | Shigella | Group I | Deseoctovirus | Deseoctovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Shigella flexneri strain ATCC 29903 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_054651 | Escherichia phage C1 | 46667 | 46.596 | Escherichia | Group I | Deseoctovirus | Deseoctovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 99.500 | AAI-based (high-confidence) | lytic | ||||
| NC_054652 | Klebsiella phage YX3973 | 46907 | 46.899 | Klebsiella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_054653 | Klebsiella virus KpV2811 | 46391 | 48.208 | Klebsiella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae capsular type K1 | High-quality | High-quality | 98.730 | AAI-based (high-confidence) | lytic | ||||
| NC_054654 | Klebsiella phage vB_KpnS_ZX4 | 45424 | 48.371 | Klebsiella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | High-quality | High-quality | 96.720 | AAI-based (high-confidence) | lytic |