INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_041882 | Mycobacterium phage SkinnyPete | 43478 | 66.353 | Mycobacterium | Group I | Charlievirus | Charlievirus | Nclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_31;immunity orf_32 | |||
| NC_041883 | Gordonia phage Attis | 47881 | 66.820 | Gordonia | Group I | Attisvirus | Attisvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_34;immunity orf_39;antirepressor orf_43 | |||
| NC_041884 | Acinetobacter phage vB_AbaM_ME3 | 234900 | 30.764 | Acinetobacter | Group I | Metrivirus | Metrivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acinetobacter baumannii DSM 30007 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_041885 | Pseudomonas phage VSW-3 | 40556 | 57.540 | Pseudomonas | Group I | Napahaivirus | Napahaivirus | Unclassified | Autonotataviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudcmonas fluorescens SW-3 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_041886 | Gordonia phage Strosahl | 52738 | 61.963 | Gordonia | Group I | Soupsvirus | Soupsvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 99.650 | AAI-based (high-confidence) | temperate | immunity orf_76 | |||
| NC_041887 | Rhodococcus phage Weasels2 | 134973 | 41.293 | Rhodococcus | Group I | Weaselvirus | Weaselvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhodococcus erythropolis RIA 643 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_041888 | Mycobacterium phage Tortellini | 49658 | 65.818 | Mycobacterium | Group I | Tortellinivirus | Tortellinivirus | Pclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.500 | AAI-based (high-confidence) | temperate | integrase orf_32;immunity orf_37;cro orf_38;antirepressor orf_40 | |||
| NC_041889 | Streptomyces phage Rima | 56168 | 59.557 | Streptomyces | Group I | Rimavirus | Rimavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces azureus NRRL B-2655 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_041890 | Propionibacterium phage Anatole | 35284 | 64.431 | Propionibacterium | Group I | Anatolevirus | Anatolevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Propionibacterium freudenreichii TL110 | High-quality | High-quality | 98.150 | AAI-based (high-confidence) | temperate | integrase orf_24;immunity orf_26;antirepressor orf_27;antirepressor orf_28 | |||
| NC_041891 | Propionibacterium phage B22 | 37219 | 65.450 | Propionibacterium | Group I | Doucettevirus | Doucettevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Propionibacterium freudenreichii TL110 | High-quality | High-quality | 98.560 | AAI-based (high-confidence) | temperate | integrase orf_29;immunity orf_31;antirepressor orf_33 |