INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_028920 | Mycobacterium phage Abrogate | 52530 | 63.756 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_36;immunity orf_67 | |||
| NC_028922 | Mycobacterium phage Cambiare | 45161 | 68.798 | Mycobacterium | Group I | Avocadovirus | Avocadovirus | Gclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028923 | Mycobacterium phage Llama | 58472 | 61.067 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacteruim smegmatis mc2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_43;immunity orf_45 | |||
| NC_028924 | Polaribacter phage P12002L | 48689 | 28.935 | Polaribacter | Group I | Incheonvirus | Incheonvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.900 | AAI-based (high-confidence) | lytic | ||||
| NC_028925 | Escherichia phage vB_EcoM_VR25 | 170822 | 40.418 | Escherichia | Group I | Gaprivervirus | Gaprivervirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028926 | Bacillus phage Palmer | 40000 | 40.668 | Bacillus | Group I | Pagevirus | Pagevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus megaterium strain Km Sp- | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028927 | Escherichia phage slur02 | 167298 | 35.516 | Escherichia | Group I | Tequatrovirus | Tequatrovirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_028928 | Mycobacterium phage Nerujay | 53455 | 63.693 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_36;immunity orf_73 | |||
| NC_028929 | Listeria phage vB_LmoS_293 | 40759 | 36.861 | Listeria | Group I | Aquingentivirus | Aquingentivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_30;cro orf_35;antirepressor orf_44 | |||
| NC_028930 | Paenibacillus phage Tripp | 54439 | 48.315 | Paenibacillus | Group I | Halcyonevirus | Halcyonevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Paenibacillus larvae ATCC 9545 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_26;antirepressor orf_33 |