INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_027334 | Aurantimonas phage AmM-1 | 47800 | 66.684 | Aurantimonas | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aurantimonas sp. C5-1 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | parA orf_36;cro orf_60 | |||
| NC_027335 | Enterococcus phage ECP3 | 145519 | 35.908 | Enterococcus | Group I | Kochikohdavirus | Kochikohdavirus | Brockvirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecalis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_027336 | Propionibacterium phage PHL009M11 | 29503 | 53.937 | Propionibacterium | Group I | Pahexavirus | Pahexavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Propionibacterium acnes | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_027337 | Escherichia phage vB_EcoM-VpaE1 | 88403 | 38.943 | Escherichia | Group I | Felixounavirus | Felixounavirus | Ounavirinae | Andersonviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli B strains | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_027339 | Enterobacteria phage SfI | 38389 | 50.116 | Enterobacteria | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Shigella flexneri serotype 1a strain 019 | High-quality | High-quality | 97.010 | AAI-based (high-confidence) | temperate | integrase orf_27;cro orf_43;cro orf_44 | |||
| NC_027340 | Erwinia phage phiEa2809 | 162160 | 50.280 | Erwinia | Group I | Nezavisimistyvirus | Nezavisimistyvirus | Unclassified | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora 1/79 | High-quality | High-quality | 98.860 | AAI-based (high-confidence) | lytic | ||||
| NC_027341 | Lactococcus phage WRP3 | 130008 | 32.360 | Lactococcus | Group I | Audreyjarvisvirus | Audreyjarvisvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_2;integrase orf_162 | |||
| NC_027342 | Proteus phage PM16 | 41268 | 41.386 | Proteus | Group I | Novosibovirus | Novosibovirus | Slopekvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Proteus mirabilis 73 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_027344 | Salmonella phage STML-198 | 158099 | 36.888 | Salmonella | Group I | Gelderlandvirus | Gelderlandvirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 94.010 | AAI-based (high-confidence) | lytic | ||||
| NC_027345 | Pseudomonas phage Pa2 | 73008 | 54.857 | Pseudomonas | Group I | Litunavirus | Litunavirus | Migulavirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PAO1 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |