INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_025453 | Enterococcus phage EFC-1 | 40286 | 35.047 | Enterococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecalis | High-quality | High-quality | 98.380 | AAI-based (high-confidence) | temperate | integrase orf_58 | |||
| NC_025454 | Ralstonia phage RS603 | 7679 | 59.370 | Ralstonia | Group II | Habenivirus | Habenivirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Ralstonia solanacearum | High-quality | High-quality | 97.510 | AAI-based (high-confidence) | lytic | ||||
| NC_025455 | Synechococcus phage S-CBP2 | 46237 | 55.034 | Synechococcus | Group I | Kembevirus | Kembevirus | Unclassified | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechococcus sp. CB0208 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_12 | |||
| NC_025456 | Synechococcus phage S-CBP1 | 46547 | 47.578 | Synechococcus | Group I | Angmobvirus | Angmobvirus | Sechaudvirinae | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechococcus sp. CB0101 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_15 | |||
| NC_025457 | Acinetobacter phage vB_AbaP_Acibel007 | 42654 | 41.166 | Acinetobacter | Group I | Daemvirus | Daemvirus | Beijerinckvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acinetobacter baumannii | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_025458 | Shewanella sp. phage 1/41 | 43510 | 42.703 | Shewanella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 97.930 | AAI-based (high-confidence) | lytic | ||||
| NC_025459 | Aeromonas phage pAh6-C | 53744 | 52.826 | Aeromonas | Group I | Pahsextavirus | Pahsextavirus | Nefertitivirinae | Chaseviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila JUNAH | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_025460 | Staphylococcus phage phiSa119 | 42600 | 33.404 | Staphylococcus | Group I | Biseptimavirus | Biseptimavirus | Bronfenbrennervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus Sau119 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_7;cro orf_8;antirepressor orf_9;integrase orf_40 | |||
| NC_025461 | Synechococcus phage S-CBP3 | 45871 | 46.949 | Synechococcus | Group I | Lirvirus | Lirvirus | Unclassified | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechococcus sp. CB0101 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_28 | |||
| NC_025462 | Acinetobacter phage vB_AbaM_Acibel004 | 99730 | 37.270 | Acinetobacter | Group I | Queenastridvirus | Queenastridvirus | Unclassified | Luriaviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acinetobacter baumannii | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic |