INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_023727 | Mycobacterium phage Vista | 68494 | 66.480 | Mycobacterium | Group I | Pegunavirus | Pegunavirus | Bclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 98.590 | AAI-based (high-confidence) | lytic | ||||
| NC_023728 | Mycobacterium phage DeadP | 56461 | 61.552 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 97.980 | AAI-based (high-confidence) | temperate | integrase orf_44;immunity orf_46 | |||
| NC_023729 | Mycobacterium phage Charlie | 43036 | 66.331 | Mycobacterium | Group I | Charlievirus | Charlievirus | Nclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_34;immunity orf_35 | |||
| NC_023730 | Mycobacterium phage Redi | 42594 | 66.145 | Mycobacterium | Group I | Charlievirus | Charlievirus | Nclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.700 | AAI-based (high-confidence) | temperate | integrase orf_34;immunity orf_35 | |||
| NC_023731 | Mycobacterium phage Trixie | 53526 | 64.464 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_32;antirepressor orf_65;immunity orf_70 | |||
| NC_023732 | Mycobacterium phage Rumpelstiltskin | 69279 | 58.911 | Mycobacterium | Group I | Faithunavirus | Faithunavirus | Lclasvirinae | Vilmaviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 91.620 | AAI-based (high-confidence) | temperate | integrase orf_39;immunity orf_41;cro orf_42 | |||
| NC_023733 | Mycobacterium phage MoMoMixon | 154573 | 64.767 | Mycobacterium | Group I | Bixzunavirus | Bixzunavirus | Ceeclamvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 96.900 | AAI-based (high-confidence) | lytic | ||||
| NC_023734 | Psychrobacter phage Psymv2 | 35725 | 44.467 | Psychrobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Psychrobacter sp. MV2 | Medium-quality | Genome-fragment | 80.020 | AAI-based (medium-confidence) | temperate | integrase orf_1;cro orf_8;cro orf_9 | |||
| NC_023735 | Rhodococcus phage ReqiPepy6 | 76797 | 53.411 | Rhodococcus | Group I | Pepyhexavirus | Pepyhexavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhodococcus equi | High-quality | High-quality | 99.310 | AAI-based (high-confidence) | lytic | ||||
| NC_023736 | Ralstonia phage RSB2 | 40411 | 61.751 | Ralstonia | Group I | Kelmasvirus | Kelmasvirus | Unclassified | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia solanacearum | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |