INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_015159 | Vibrio phage ICP3 | 39162 | 42.858 | Vibrio | Group I | Chatterjeevirus | Chatterjeevirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 99.300 | AAI-based (high-confidence) | lytic | ||||
| NC_015208 | Pseudomonas phage phi15 | 39562 | 58.164 | Pseudomonas | Group I | Troedvirus | Troedvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.080 | AAI-based (high-confidence) | lytic | ||||
| NC_015209 | Vibrio phage CTXphi | 10638 | 44.623 | Vibrio | Group II | Affertcholeramvirus | Affertcholeramvirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Vibrio cholerae KMN002 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_015210 | Tsukamurella phage TPA2 | 61440 | 69.574 | Tsukamurella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Tsukamurella paurometabola | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_015249 | Escherichia phage 285P | 39270 | 48.732 | Escherichia | Group I | Berlinvirus | Berlinvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 98.280 | AAI-based (high-confidence) | lytic | ||||
| NC_015250 | Acinetobacter phage 133 | 159801 | 39.672 | Acinetobacter | Group I | Centumtrigintavirus | Centumtrigintavirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acinetobacter johnsonii | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_015251 | Aeromonas phage 65 | 235229 | 37.196 | Aeromonas | Group I | Ishigurovirus | Ishigurovirus | Emmerichvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas salmonicida | High-quality | High-quality | 98.950 | AAI-based (high-confidence) | lytic | ||||
| NC_015252 | Brochothrix phage NF5 | 36953 | 37.296 | Brochothrix | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Brochothrix thermosphacta | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_26;antirepressor orf_30 | |||
| NC_015253 | Brochothrix phage A9 | 127065 | 41.424 | Brochothrix | Group I | Klumppvirus | Klumppvirus | Unclassified | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Brochothrix thermosphacta HER1187 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_015254 | Brochothrix phage BL3 | 41518 | 36.377 | Brochothrix | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Brochothrix thermosphacta | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | antirepressor orf_32 |