INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_010808 | Staphylococcus phage phiMR25 | 44342 | 34.326 | Staphylococcus | Group I | Dubowvirus | Dubowvirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_6;antirepressor orf_7;integrase orf_39 | |||
| NC_010811 | Ralstonia phage phiRSL1 | 231255 | 58.026 | Ralstonia | Group I | Mieseafarmvirus | Mieseafarmvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_010821 | Pseudomonas phage 201phi2-1 | 316674 | 45.344 | Pseudomonas | Group I | Serwervirus | Serwervirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas chlororaphis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_010945 | Streptococcus phage PH15 | 39136 | 40.507 | Streptococcus | Group I | Aliceevansviridae | Unclassified | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus gordonii | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1 | |||
| NC_011019 | Mycobacterium phage KBG | 53572 | 63.572 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_38;immunity orf_70 | |||
| NC_011020 | Mycobacterium phage Jasper | 50968 | 63.713 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium sp. | High-quality | High-quality | 98.180 | AAI-based (high-confidence) | temperate | integrase orf_36;immunity orf_72 | |||
| NC_011021 | Mycobacterium phage Lockley | 51478 | 63.425 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium sp. | High-quality | High-quality | 99.150 | AAI-based (high-confidence) | temperate | integrase orf_37;immunity orf_73 | |||
| NC_011022 | Mycobacterium phage DD5 | 51621 | 63.387 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium sp. | High-quality | High-quality | 99.420 | AAI-based (high-confidence) | temperate | integrase orf_38;immunity orf_74 | |||
| NC_011023 | Mycobacterium phage Pukovnik | 52892 | 63.263 | Mycobacterium | Group I | Pukovnikvirus | Pukovnikvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_32;antirepressor orf_64;immunity orf_68 | |||
| NC_011038 | Yersinia phage Yepe2 | 38677 | 47.266 | Yersinia | Group I | Berlinvirus | Berlinvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia pestis | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |