INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_010155 | Betalipothrixvirus acidiani | 40449 | 36.854 | Unspecified | Group I | Betalipothrixvirus | Betalipothrixvirus | Unclassified | Lipothrixviridae | Ligamenvirales | Tokiviricetes | Taleaviricota | Zilligvirae | Adnaviria | Unspecified | Complete | High-quality | 100.000 | ITR (high-confidence) | lytic | ||||
| NC_010179 | Lactobacillus prophage Lj771 | 40881 | 36.401 | Lactobacillus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactobacillus johnsonii | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_4;antirepressor orf_15 | |||
| NC_010237 | Escherichia phage Min27 | 63395 | 49.504 | Escherichia | Group I | Traversvirus | Traversvirus | Sepvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli O157:H7 str. Min27 | High-quality | High-quality | 96.660 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_28;cro orf_29;antirepressor orf_41;antirepressor orf_55;antirepressor orf_93 | |||
| NC_010275 | Vibrio phage Kappa | 33507 | 48.835 | Vibrio | Group I | Longwoodvirus | Longwoodvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.130 | AAI-based (high-confidence) | temperate | integrase orf_1 | |||
| NC_010324 | Escherichia phage phiEco32 | 77554 | 42.274 | Escherichia | Group I | Kuravirus | Kuravirus | Gordonclarkvirinae | Mtkvariviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_010325 | Bruynoghevirus LUZ24 | 45625 | 52.248 | Unspecified | Group I | Bruynoghevirus | Bruynoghevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_010326 | Pseudomonas phage LUZ19 | 43548 | 62.278 | Pseudomonas | Group I | Phikmvvirus | Phikmvvirus | Krylovirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PAO1 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_010342 | Halomonas phage phiHAP-1 | 39245 | 58.978 | Halomonas | Group I | Hapunavirus | Hapunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Halomonas aquamarina | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | parA orf_38;integrase orf_39;antirepressor orf_43 | |||
| NC_010353 | Streptococcus phage 858 | 35543 | 39.786 | Streptococcus | Group I | Brussowvirus | Brussowvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus | High-quality | High-quality | 94.120 | AAI-based (high-confidence) | temperate | cro orf_30 | |||
| NC_010355 | Azospirillum phage Cd | 62337 | 63.932 | Azospirillum | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Azospirillum brasilense Cd | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_87 |