INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_009811 | Listeria phage A511 | 137619 | 35.929 | Listeria | Group I | Pecentumvirus | Pecentumvirus | Jasinskavirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_009812 | Listeria phage B025 | 42653 | 35.100 | Listeria | Group I | Jelitavirus | Jelitavirus | Trabyvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_33;cro orf_36 | |||
| NC_009813 | Listeria phage B054 | 48172 | 36.212 | Listeria | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | High-quality | High-quality | 99.900 | AAI-based (high-confidence) | temperate | integrase orf_37;antirepressor orf_71 | |||
| NC_009814 | Listeria phage P35 | 35822 | 40.818 | Listeria | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_009815 | Listeria phage A006 | 38124 | 35.497 | Listeria | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_29;antirepressor orf_37 | |||
| NC_009816 | Corynebacterium phage P1201 | 70579 | 50.919 | Corynebacterium | Group I | Chunghsingvirus | Chunghsingvirus | Toshachvirinae | Zierdtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Corynebacterium glutamicum | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | antirepressor orf_6 | |||
| NC_009817 | Lactococcus phage KSY1 | 79232 | 35.111 | Lactococcus | Group I | Chopinvirus | Chopinvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_009818 | Pseudomonas phage MP22 | 36409 | 64.190 | Pseudomonas | Group I | Casadabanvirus | Casadabanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa UCBPP-PA14 | High-quality | High-quality | 95.590 | AAI-based (high-confidence) | temperate | cro orf_1;integrase orf_5 | |||
| NC_009819 | Streptococcus phage P9 | 40539 | 39.651 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus equi | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1 | |||
| NC_009820 | Mycobacterium phage Tweety | 58692 | 61.739 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_41;immunity orf_43;antirepressor orf_45 |