INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_008363 | Lactococcus phage P008 | 28538 | 34.680 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis subsp. lactis Il1403 | High-quality | High-quality | 94.060 | AAI-based (high-confidence) | lytic | ||||
| NC_008364 | Lactococcus phage Q54 | 26537 | 37.099 | Lactococcus | Group I | Questintvirus | Questintvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_008367 | Phormidium phage Pf-WMP4 | 40938 | 51.803 | Phormidium | Group I | Wumpquatrovirus | Wumpquatrovirus | Unclassified | Saffermanviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Phormidium | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_008370 | Lactococcus phage 712 | 30510 | 33.884 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_008371 | Lactococcus virus jj50 | 27453 | 34.943 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 90.540 | AAI-based (high-confidence) | lytic | ||||
| NC_008376 | Geobacillus phage GBSV1 | 34683 | 44.379 | Geobacillus | Group I | Svunavirus | Svunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Geobacillus sp. 6k51 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_43;antirepressor orf_49 | |||
| NC_008464 | Stx2-converting phage 86 | 60238 | 49.067 | Unspecified | Group I | Traversvirus | Traversvirus | Sepvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 91.800 | AAI-based (high-confidence) | temperate | antirepressor orf_8;integrase orf_35;antirepressor orf_41;cro orf_64;cro orf_65 | |||
| NC_008515 | Escherichia phage RB32 | 165890 | 35.340 | Escherichia | Group I | Tequatrovirus | Tequatrovirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.620 | AAI-based (high-confidence) | lytic | ||||
| NC_008562 | Microcystis phage LMM01 | 162109 | 45.953 | Microcystis | Group I | Fukuivirus | Fukuivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 95.800 | AAI-based (high-confidence) | temperate | antirepressor orf_9;antirepressor orf_23;integrase orf_176 | |||
| NC_008574 | Ralstonia phage RSM1 | 9004 | 59.951 | Ralstonia | Group II | Habenivirus | Habenivirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic |