Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MZ958748Mycobacterium phage JuicyJay11307560.850MycobacteriumGroup I OmegavirusOmegavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) OmegavirusOmegavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_79;immunity orf_92
MZ958749Microbacterium phage SJay4184763.484MicrobacteriumGroup I IlzatvirusIlzatvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224High-qualityHigh-quality100.000AAI-based (high-confidence) IlzatvirusIlzatvirus teaganCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ958750Streptomyces phage Targaryen13492049.529StreptomycesGroup I SamistivirusSamistivirusBoydwoodruffvirinaeStanwilliamsviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces lividans JI 1326CompleteHigh-quality100.000DTR (high-confidence) SamistivirusSamistivirus evyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ967493Acinetobacter phage APK37.14096639.184AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumannii strain KZ-1101CompleteHigh-quality100.000DTR (high-confidence) FriunavirusFriunavirus APK371Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ969012Mycobacterium phage Saroj5495861.381MycobacteriumGroup I GracegardnervirinaeUnclassifiedGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycolibacterium smegmatis mc^2 155High-qualityHigh-quality97.710AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_44;cro orf_47;antirepressor orf_48
MZ969646Bacillus phage BUCT08212501634.789BacillusGroup I SpbetavirusSpbetavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilisHigh-qualityHigh-quality97.190AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_32;antirepressor orf_137;integrase orf_149
MZ983385Psychrobacillus phage PVJ15318737.015PsychrobacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Psychrobacillus sp. GC2J1High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_32;integrase orf_36
MZ995503Pasteurella phage vB_PmuP_PS073803840.772PasteurellaGroup I WuhanvirusWuhanvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pasteurella multocidaHigh-qualityHigh-quality99.220AAI-based (high-confidence) WuhanvirusWuhanvirus PS07Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ995504Riemerella phage vB_RanS_PT034400134.813RiemerellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Riemerella anatipestiferHigh-qualityHigh-quality94.940AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_9;antirepressor orf_34
MZ995505Clostridium phage vB_CpeP_PMQ043894730.613ClostridiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Clostridium perfringensHigh-qualityHigh-quality99.580AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_26
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