Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MZ892990Roseobacter phage CRP-3455471842.154RoseobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhodobacteraceae bacterium FZCC0042High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_18
MZ892991Roseobacter phage CRP-6035455143.119RoseobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhodobacteraceae bacterium FZCC0012High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MZ892992Roseobacter phage CRP-7385382645.640RoseobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhodobacteraceae bacterium FZCC0089High-qualityHigh-quality99.780AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MZ892993Pelagibacter phage HTVC033P5307533.780PelagibacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Candidatus Pelagibacter sp. HTCC1062High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MZ911962Escherichia phage PLYYY015702544.737EscherichiaGroup I SeuratvirusSeuratvirusQueuovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality95.700AAI-based (high-confidence) SeuratvirusSeuratvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ923504Microcystis phage MinS14996671.671MicrocystisGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microcystis aeruginosaHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_28;integrase orf_31
MZ923531Salmonella phage PRF-SP13973250.340SalmonellaGroup I KayfunavirusKayfunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Paratyphi ACompleteHigh-quality100.000DTR (high-confidence) KayfunavirusKayfunavirus PRFSP1The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MZ926748Pseudomonas phage AIIMS-Plu-RaNi4664764.452PseudomonasGroup I AbidjanvirusAbidjanvirusBradleyvirinaeMesyanzhinovviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas luteolaMedium-qualityGenome-fragment76.320AAI-based (high-confidence) AbidjanvirusAbidjanvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ927745Pseudomonas phage Kaya4306754.292PseudomonasGroup I SeptimatrevirusSeptimatrevirusJondennisvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa 2081High-qualityHigh-quality100.000AAI-based (high-confidence) SeptimatrevirusSeptimatrevirus kayaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ927746Pseudomonas phage Guyu4314154.839PseudomonasGroup I SeptimatrevirusSeptimatrevirusJondennisvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa 2072High-qualityHigh-quality100.000AAI-based (high-confidence) SeptimatrevirusSeptimatrevirus guyuCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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