Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MZ501266Erwinia phage AH034386643.774ErwiniaGroup I AhotrevirusAhotrevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia billingiae and Pseudomonas syringaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) AhotrevirusAhotrevirus AH03Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ501267Erwinia phage AH0426263943.324ErwiniaGroup I MeadowvirusMeadowvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia billingiaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) MeadowvirusMeadowvirus AH04Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ501268Erwinia phage AH0627529348.066ErwiniaGroup I AgricanvirusAgricanvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia billingiaeHigh-qualityHigh-quality99.360AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
MZ501269Pantoea phage AH014606252.232PantoeaGroup I GuernseyvirinaeUnclassifiedGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pantoea sp.High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MZ501270Pantoea phage AH073785952.220PantoeaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pantoea sp.High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_28;cro orf_38
MZ501271Pseudomonas phage AH023909554.946PseudomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas koreensisHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MZ501272Pseudomonas phage AH054050257.254PseudomonasGroup I GhunavirusGhunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas syringaeCompleteHigh-quality100.000DTR (high-confidence) GhunavirusGhunavirus AH05Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ502379Escherichia phage vB_EcoM_Shinka16216035.419EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli R10256High-qualityHigh-quality96.430AAI-based (high-confidence) TequatrovirusTequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ502380Escherichia phage vB_EcoM_Nami16567935.529EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli R10256High-qualityHigh-quality98.480AAI-based (high-confidence) TequatrovirusTequatrovirus ecnp1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ503612Fusobacterium phage FNU_1P4188827.378FusobacteriumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Fusobacterium nucleatumHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_30;integrase orf_32
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