INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MZ436830	Escherichia phage JK1	166057	35.483	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli DH5a	High-quality	High-quality	98.760	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ440881	Klebsiella phage ZCKP8	48490	47.509	Klebsiella	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
MZ443769	Erwinia phage pEp_SNUABM_52	261095	47.181	Erwinia	Group I	Sasquatchvirus	Sasquatchvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	98.580	AAI-based (high-confidence)	Sasquatchvirus	Sasquatchvirus Y3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_30;integrase orf_317
MZ443770	Erwinia phage pEa_SNUABM_3	266175	49.503	Erwinia	Group I	Alexandravirus	Alexandravirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	100.000	AAI-based (high-confidence)	Alexandravirus	Alexandravirus SNUABM3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ443771	Erwinia phage pEa_SNUABM_20	265871	49.508	Erwinia	Group I	Alexandravirus	Alexandravirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	100.000	AAI-based (high-confidence)	Alexandravirus	Alexandravirus SNUABM3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ443772	Erwinia phage pEa_SNUABM_23	265846	49.516	Erwinia	Group I	Alexandravirus	Alexandravirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	100.000	AAI-based (high-confidence)	Alexandravirus	Alexandravirus SNUABM3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ443773	Erwinia phage pEa_SNUABM_31	265846	49.516	Erwinia	Group I	Alexandravirus	Alexandravirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	100.000	AAI-based (high-confidence)	Alexandravirus	Alexandravirus SNUABM3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ443774	Erwinia phage pEa_SNUABM_32	265891	49.186	Erwinia	Group I	Alexandravirus	Alexandravirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	100.000	AAI-based (high-confidence)	Alexandravirus	Alexandravirus SNUABM32	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_328
MZ443776	Erwinia phage pEa_SNUABM_1	266939	49.447	Erwinia	Group I	Alexandravirus	Alexandravirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	100.000	AAI-based (high-confidence)	Alexandravirus	Alexandravirus SNUABM1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ443777	Erwinia phage pEa_SNUABM_17	263916	49.000	Erwinia	Group I	Alexandravirus	Alexandravirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	99.590	AAI-based (high-confidence)	Alexandravirus	Alexandravirus SNUABM17	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic