Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MZ417343Staphylococcus phage PG-2021_748576229.688StaphylococcusGroup I SextaecvirusSextaecvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus epidermidis I0515High-qualityHigh-quality93.350AAI-based (high-confidence) SextaecvirusSextaecvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_54
MZ417344Staphylococcus phage PG-2021_7613943931.591StaphylococcusGroup I SciuriunavirusSciuriunavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mammaliicoccus vitulinus C5817High-qualityHigh-quality100.000AAI-based (high-confidence) SciuriunavirusSciuriunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ417345Staphylococcus phage PG-2021_8414129130.756StaphylococcusGroup I TwortvirinaeUnclassifiedTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus xylosus M1997-2/10CompleteHigh-quality100.000DTR (high-confidence) KayvirusKayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ417346Staphylococcus phage PG-2021_8614196530.829StaphylococcusGroup I TwortvirinaeUnclassifiedTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus xylosus M1997-2/10High-qualityHigh-quality100.000AAI-based (high-confidence) KayvirusKayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ417347Staphylococcus phage PG-2021_8714121230.754StaphylococcusGroup I TwortvirinaeUnclassifiedTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus xylosus M1997-2/10High-qualityHigh-quality99.870AAI-based (high-confidence) KayvirusKayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ417348Staphylococcus phage PG-2021_889222229.413StaphylococcusGroup I SextaecvirusSextaecvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus epidermidis C6869CompleteHigh-quality100.000DTR (high-confidence) SextaecvirusSextaecvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_17
MZ417349Staphylococcus phage PG-2021_894303935.108StaphylococcusGroup I RockefellervirusRockefellervirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus epidermidis NCC 100655High-qualityHigh-quality100.000AAI-based (high-confidence) RockefellervirusRockefellervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_5;antirepressor orf_9;integrase orf_72
MZ417350Staphylococcus phage PG-2021_813970930.936StaphylococcusGroup I TwortvirinaeUnclassifiedTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus equorum C5824High-qualityHigh-quality98.810AAI-based (high-confidence) KayvirusKayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ417351Staphylococcus phage PG-2021_904449334.718StaphylococcusGroup I RockefellervirusRockefellervirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus epidermidis NCC 100655CompleteHigh-quality100.000DTR (high-confidence) RockefellervirusRockefellervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_56;cro orf_58;integrase orf_61
MZ417352Staphylococcus phage PG-2021_914218834.967StaphylococcusGroup I RockefellervirusRockefellervirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus epidermidis NCC 100655CompleteHigh-quality100.000DTR (high-confidence) RockefellervirusRockefellervirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_50;integrase orf_54
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