INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MZ359670 | Klebsiella phage 066044 | 38704 | 50.922 | Klebsiella | Group I | Teetrevirus | Teetrevirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | Complete | High-quality | 100.000 | DTR (high-confidence) | Teetrevirus | Teetrevirus tv066044 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ361825 | Listeria phage vB_LmoS_P9 | 36798 | 36.673 | Listeria | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | High-quality | High-quality | 91.270 | AAI-based (high-confidence) | Aquingentivirus | Aquingentivirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | antirepressor orf_46;integrase orf_56 |
| MZ361826 | Hydrogenophilus phage vB_LmoS_C996 | 40770 | 36.914 | Hydrogenophilus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Hydrogenophilus thermoluteolus | High-quality | High-quality | 96.170 | AAI-based (high-confidence) | Aquingentivirus | Aquingentivirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_27;antirepressor orf_28 |
| MZ361827 | Aquingentivirus P7 | 42553 | 36.646 | Unspecified | Group I | Aquingentivirus | Aquingentivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Aquingentivirus | Aquingentivirus P7 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | antirepressor orf_2;integrase orf_12;antirepressor orf_69 |
| MZ364222 | robinz microvirus RP_29 | 4731 | 50.328 | Unspecified | Group II | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Petroica australis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | unknown | |
| MZ364223 | robinz microvirus RP_30 | 4722 | 50.339 | Unspecified | Group II | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Petroica australis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | unknown | |
| MZ364224 | robinz microvirus RP_32 | 4384 | 50.091 | Unspecified | Group II | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Petroica australis | High-quality | High-quality | 99.860 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | unknown | |
| MZ364225 | robinz microvirus RP_33 | 4384 | 50.091 | Unspecified | Group II | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Petroica australis | High-quality | High-quality | 99.850 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | unknown | |
| MZ364226 | robinz microvirus RP_34 | 4780 | 54.226 | Unspecified | Group II | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Petroica australis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | unknown | |
| MZ364227 | robinz microvirus RP_35 | 4364 | 57.195 | Unspecified | Group II | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Petroica australis | High-quality | High-quality | 98.690 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | unknown |