Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MW924649Mycobacterium phage Akhila5625162.056MycobacteriumGroup I CheoctovirusCheoctovirusGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.580AAI-based (high-confidence) CheoctovirusCheoctovirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateimmunity orf_32;integrase orf_37;cro orf_40
MW924650Gordonia phage Neobush5090666.670GordoniaGroup I NymphadoravirusNymphadoravirusNymbaxtervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality97.020AAI-based (high-confidence) NymphadoravirusNymphadoravirus kitaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_38;immunity orf_43;antirepressor orf_47
MW924889Staphylococcus phage vB_StaphS-IVBph3544197032.964StaphylococcusGroup I BiseptimavirusBiseptimavirusBronfenbrennervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality98.970AAI-based (high-confidence) BiseptimavirusBiseptimavirus P282The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_25;cro orf_31;cro orf_32
MW926912Acinetobacter phage vB_AbaP_1004174339.571AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiHigh-qualityHigh-quality100.000AAI-based (high-confidence) FriunavirusFriunavirus WCHABP5Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW927511Paenibacillus phage AlexiD3799741.764PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvae NW6High-qualityHigh-quality94.910AAI-based (high-confidence) FernvirusFernvirus raniCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_26;integrase orf_27;antirepressor orf_30;antirepressor orf_32;antirepressor orf_36
MW927512Paenibacillus phage Bert3873541.203PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvae ATCC 9545High-qualityHigh-quality96.340AAI-based (high-confidence) FernvirusFernvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;antirepressor orf_40
MW927513Paenibacillus phage Bohemia3967042.014PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvae NW6High-qualityHigh-quality98.880AAI-based (high-confidence) FernvirusFernvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_30;antirepressor orf_35;antirepressor orf_40
MW927514Paenibacillus phage Fitz4114341.533PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvae ATCC 9545High-qualityHigh-quality100.000AAI-based (high-confidence) FernvirusFernvirus shellyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_32;antirepressor orf_36;antirepressor orf_40;integrase orf_59
MW927515Paenibacillus phage Gohan4208341.501PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvae ATCC 9545High-qualityHigh-quality100.000AAI-based (high-confidence) FernvirusFernvirus shellyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_33;antirepressor orf_37;antirepressor orf_41;integrase orf_60
MW927516Paenibacillus phage Hobie3941741.723PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvae NW6High-qualityHigh-quality98.210AAI-based (high-confidence) FernvirusFernvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_32;antirepressor orf_36;antirepressor orf_40
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