Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MW883060Escherichia phage vB_EcoP_SYGE13971348.438EscherichiaGroup I TeseptimavirusTeseptimavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli str. K-12 substr. MG1655CompleteHigh-quality100.000DTR (high-confidence) TeseptimavirusTeseptimavirus SYGE1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW883061Escherichia phage vB_EcoM_SYGMH113742343.606EscherichiaGroup I VequintavirusVequintavirusVequintavirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli min27High-qualityHigh-quality97.980AAI-based (high-confidence) VequintavirusVequintavirus SYGMH1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW900438Vibrio phage vB_ValP_VA-RY-34027143.989VibrioGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio alginolyticus RY-3High-qualityHigh-quality99.110AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW911612Vibrio phage ICP112170837.136VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio cholerae O1CompleteHigh-quality100.000DTR (high-confidence) MohonavirusMohonavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_221
MW911613Vibrio phage ICP112192837.139VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio cholerae O1High-qualityHigh-quality91.210AAI-based (high-confidence) MohonavirusMohonavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_151
MW911614Vibrio phage ICP112167137.140VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio cholerae O1CompleteHigh-quality100.000DTR (high-confidence) MohonavirusMohonavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_22
MW911615Vibrio phage ICP112157037.124VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio cholerae O1CompleteHigh-quality100.000DTR (high-confidence) MohonavirusMohonavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_60
MW916539Bacteroides phage GEC_vB_Bfr_VA74709538.526BacteroidesGroup I GotuavirusGotuavirusCardingvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacteroides fragilisHigh-qualityHigh-quality100.000AAI-based (high-confidence) GotuavirusGotuavirus VA7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_64
MW924497Staphylococcus phage PHB214526033.959StaphylococcusGroup I TriavirusTriavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureus SA14High-qualityHigh-quality96.940AAI-based (high-confidence) TriavirusTriavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_28;cro orf_33;antirepressor orf_35;integrase orf_70
MW924638Microbacterium phage Fizzles6207868.161MicrobacteriumGroup I SquashvirusSquashvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
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