INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MW366784	Acinetobacter phage Paty	41264	39.419	Acinetobacter	Group I	Friunavirus	Friunavirus	Beijerinckvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii	High-quality	High-quality	99.610	AAI-based (high-confidence)	Friunavirus	Friunavirus Paty	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW366843	Erwinia phage pEa_SNUABM_5	267169	48.857	Erwinia	Group I	Rivsvirus	Rivsvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	100.000	AAI-based (high-confidence)	Rivsvirus	Rivsvirus SNUABM5	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_341
MW367417	Pectobacterium phage PcCB7V	146054	50.387	Pectobacterium	Group I	Certrevirus	Certrevirus	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium sp. 7V	High-quality	High-quality	99.540	AAI-based (high-confidence)	Certrevirus	Certrevirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MW367418	Pectobacterium phage PcCB251	40557	48.603	Pectobacterium	Group I	Berlinvirus	Berlinvirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium sp. Pc251	Complete	High-quality	100.000	DTR (high-confidence)	Berlinvirus	Berlinvirus PcCB251	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_6
MW367898	Proteus phage SJ_PmiM	164100	31.074	Proteus	Group I	Bragavirus	Bragavirus	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Proteus mirabilis HLJP-1	High-quality	High-quality	99.700	AAI-based (high-confidence)	Bragavirus	Bragavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW373745	Campylobacter phage CJLB-13	210101	27.565	Campylobacter	Group I	Firehammervirus	Firehammervirus	Unclassified	Connertonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Campylobacter jejuni	High-quality	High-quality	100.000	AAI-based (high-confidence)	Firehammervirus	Firehammervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_249
MW380983	Aeromonas phage PVN03	50725	52.347	Aeromonas	Group I	Phayathaivirus	Phayathaivirus	Nefertitivirinae	Chaseviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas hydrophila 4.3T	High-quality	High-quality	96.700	AAI-based (high-confidence)	Phayathaivirus	Phayathaivirus PVN03	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MW380984	Aeromonas phage PVN04	51721	52.443	Aeromonas	Group I	Pahsextavirus	Pahsextavirus	Nefertitivirinae	Chaseviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas hydrophila 4.3T	High-quality	High-quality	98.270	AAI-based (high-confidence)	Phayathaivirus	Phayathaivirus pAh62TG	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MW380985	Aeromonas phage PVN05	51884	52.428	Aeromonas	Group I	Pahsextavirus	Pahsextavirus	Nefertitivirinae	Chaseviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas hydrophila 4.4T	High-quality	High-quality	99.110	AAI-based (high-confidence)	Phayathaivirus	Phayathaivirus PVN03	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MW384823	Erwinia phage pEa_SNUABM_43	241904	51.338	Erwinia	Group I	Machinavirus	Machinavirus	Unclassified	Chimalliviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora	High-quality	High-quality	99.990	AAI-based (high-confidence)	Machinavirus	Machinavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic