Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MW057783Campylobacter phage CJLB-44836149.865CampylobacterGroup I LambdavirusLambdavirusJacobvirinaeZimmerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Campylobacter jejuniHigh-qualityHigh-quality100.000AAI-based (high-confidence) LambdavirusLambdavirus lambdaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_28;cro orf_45;cro orf_46
MW057854Providencia phage PSTCR24020042.271ProvidenciaGroup I SolymavirusSolymavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) SolymavirusSolymavirus PSTCR2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW057855Providencia phage PSTCR33944741.879ProvidenciaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_29;cro orf_39
MW057856Providencia phage PSTCR45721436.886ProvidenciaGroup I CraquatrovirusCraquatrovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiHigh-qualityHigh-quality99.350AAI-based (high-confidence) CraquatrovirusCraquatrovirus PSTCR4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW057857Providencia phage PSTCR510943439.999ProvidenciaGroup I PriunavirusPriunavirusUnclassifiedDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiHigh-qualityHigh-quality96.350AAI-based (high-confidence) PriunavirusPriunavirus PSTCR5Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW057858Providencia phage PSTCR615573735.914ProvidenciaGroup I StraboviridaeUnclassifiedUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW057859Providencia phage PSTCR8lys4028041.889ProvidenciaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1
MW057860Providencia phage PSTCR95887349.474ProvidenciaGroup I RedjacvirusRedjacvirusUnclassifiedCasjensviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiHigh-qualityHigh-quality98.470AAI-based (high-confidence) RedjacvirusRedjacvirus redjacCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW057861Providencia phage PSTCR75798636.880ProvidenciaGroup I CraquatrovirusCraquatrovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) CraquatrovirusCraquatrovirus PSTCR7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW057862Providencia phage PSTCR7lys2293841.695ProvidenciaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiMedium-qualityGenome-fragment50.430AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperatecro orf_9
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