INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MW021765	Klebsiella phage vB_KpnS_IMGroot	52866	51.347	Klebsiella	Group I	Webervirus	Webervirus	Unclassified	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Webervirus	Webervirus IMGroot	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021766	Serratia phage vB_SmaS_Opt-148	41293	45.741	Serratia	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Serratia marcescens	High-quality	High-quality	100.000	AAI-based (medium-confidence)	Bonzeevirus	Bonzeevirus bigdog	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021767	Serratia phage vB_SmaS_Opt-169	38609	42.257	Serratia	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Serratia marcescens	High-quality	High-quality	96.940	AAI-based (medium-confidence)	Rovertvirus	Rovertvirus rovert	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW023914	Rhizobium phage vB_RleA_TRX32-1	42787	59.226	Rhizobium	Group I	Paadamvirus	Paadamvirus	Unclassified	Unclassified	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Rhizobium leguminosarum TRX32	High-quality	High-quality	100.000	AAI-based (high-confidence)	Paadamvirus	Paadamvirus TRX321	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_54
MW032452	Enterobacter phage N5822	78128	48.765	Enterobacter	Group I	Henuseptimavirus	Henuseptimavirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Henuseptimavirus	Henuseptimavirus samwise	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW032477	Lactococcus phage FB14	31042	34.492	Lactococcus	Group I	Skunavirus	Skunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis subsp. cremoris	High-quality	High-quality	100.000	AAI-based (high-confidence)	Skunavirus	Skunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW041632	Lactococcus phage FB3	28969	34.789	Lactococcus	Group I	Skunavirus	Skunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis subsp. cremoris SMQ-1021	High-quality	High-quality	95.540	AAI-based (high-confidence)	Skunavirus	Skunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW041633	Lactococcus phage FB6	30766	34.499	Lactococcus	Group I	Skunavirus	Skunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis subsp. cremoris SMQ-1021	High-quality	High-quality	100.000	AAI-based (high-confidence)	Skunavirus	Skunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW041634	Lactococcus phage GP14	29200	34.575	Lactococcus	Group I	Skunavirus	Skunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis subsp. cremoris SMQ-999	High-quality	High-quality	96.300	AAI-based (high-confidence)	Skunavirus	Skunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW041635	Lactococcus phage GP15	29166	34.636	Lactococcus	Group I	Skunavirus	Skunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis subsp. cremoris SMQ-999	High-quality	High-quality	96.190	AAI-based (high-confidence)	Skunavirus	Skunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic