Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MW013503Salmonella phage L cII-1014066447.514SalmonellaGroup I LederbergvirusLederbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica enterica sv Typhimurium LT2High-qualityHigh-quality99.080AAI-based (high-confidence) LederbergvirusLederbergvirus ST64TThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_18;integrase orf_34;antirepressor orf_42
MW015080Synechococcus phage S-SRP014501748.868SynechococcusGroup I NerivirusNerivirusSechaudvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. KCZYR4S1CompleteHigh-quality100.000DTR (high-confidence) NerivirusNerivirus SSRP01Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_15
MW015081Synechococcus phage S-SRM0124084235.642SynechococcusGroup I SerangoonvirusSerangoonvirusUnclassifiedKyanoviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. KCZYC6CompleteHigh-quality100.000DTR (high-confidence) SerangoonvirusSerangoonvirus essaroneCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW021748Citrobacter phage vB_CfrD_ZerotoHero4980242.850CitrobacterGroup I TlsvirusTlsvirusTempevirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Citrobacter freundiiiHigh-qualityHigh-quality98.720AAI-based (high-confidence) TlsvirusTlsvirus blueshaddowCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_80
MW021749Citrobacter phage vB_Cfr_Xman17833143.174CitrobacterGroup I PseudotevenvirusPseudotevenvirusUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Citrobacter sp.High-qualityHigh-quality100.000AAI-based (high-confidence) PseudotevenvirusPseudotevenvirus millerCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW021750Citrobacter phage vB_CfrD_Supreme2844943942.851CitrobacterGroup I TlsvirusTlsvirusTempevirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Citrobacter freundiiHigh-qualityHigh-quality98.080AAI-based (high-confidence) TlsvirusTlsvirus mishyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_78
MW021751Cronobacter phage vB_CsaM_Cronuts17788244.540CronobacterGroup I PseudotevenvirusPseudotevenvirusUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cronobacter sakazakiiHigh-qualityHigh-quality99.880AAI-based (high-confidence) PseudotevenvirusPseudotevenvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW021752Klebsiella phage vB_KpnM_BovinicusUrsus16682939.587KlebsiellaGroup I JiaodavirusJiaodavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality98.820AAI-based (high-confidence) JiaodavirusJiaodavirus jd18Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW021753Salmonella phage AR281915689944.968SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica serovar Typhimurium LT2High-qualityHigh-quality99.280AAI-based (high-confidence) KuttervirusKuttervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW021754Salmonella phage FrontPhageNews15783244.612SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica serovar TyphimuriumHigh-qualityHigh-quality99.860AAI-based (high-confidence) KuttervirusKuttervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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