INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
MT682388	Aeromonas phage Atoyac13	41639	59.267	Aeromonas	Group I	Melnykvirinae	Unclassified	Melnykvirinae	Autonotataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas sp. PIA_XB1_6	High-quality	High-quality	99.450	AAI-based (high-confidence)	Atoyacvirus	Atoyacvirus atoyac1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT682389	Aeromonas phage Atoyac14	41707	59.302	Aeromonas	Group I	Melnykvirinae	Unclassified	Melnykvirinae	Autonotataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas sp. PIA_XB1_6	High-quality	High-quality	99.620	AAI-based (high-confidence)	Atoyacvirus	Atoyacvirus atoyac1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT682390	Aeromonas phage Atoyac15	42010	58.912	Aeromonas	Group I	Atoyacvirus	Atoyacvirus	Melnykvirinae	Autonotataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas sp. PIA_XB1_6	High-quality	High-quality	100.000	AAI-based (high-confidence)	Atoyacvirus	Atoyacvirus atoyac15	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT682391	Aeromonas phage Atoyac23	41506	59.196	Aeromonas	Group I	Melnykvirinae	Unclassified	Melnykvirinae	Autonotataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas sp. PIA_XB1_6	High-quality	High-quality	99.130	AAI-based (high-confidence)	Atoyacvirus	Atoyacvirus atoyac1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT682705	Escherichia phage vB_EcoS_SP8	57585	43.258	Escherichia	Group I	Nonagvirus	Nonagvirus	Queuovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	96.780	AAI-based (high-confidence)	Nonagvirus	Nonagvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT682706	Escherichia phage vB_EcoS_FP	43757	44.091	Escherichia	Group I	Veterinaerplatzvirus	Veterinaerplatzvirus	Braunvirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	95.490	AAI-based (high-confidence)	Veterinaerplatzvirus	Veterinaerplatzvirus FP	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MT682707	Escherichia phage vB_EcoP_SP7	39305	50.073	Escherichia	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	98.810	AAI-based (high-confidence)	Kayfunavirus	Kayfunavirus SP7	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MT682708	Escherichia phage vB_EcoP_SP5M	72896	43.181	Escherichia	Group I	Gamaleyavirus	Gamaleyavirus	Enquatrovirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	100.000	AAI-based (high-confidence)	Gamaleyavirus	Gamaleyavirus Sp5m	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT682709	Escherichia phage vB_EcoM_SP1	165416	35.579	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	98.380	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT682710	Escherichia phage vB_EcoM_FT	167431	35.320	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	99.740	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic