INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Explore INPHARED2 data visually

Create interactive summaries of genome metadata and download the resulting figures.

Open graphs

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

Family (NCBI)

Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

Rows

Clear

Choose fields for download

37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
MT670417	Pseudomonas phage phiPsa267	100180	47.714	Pseudomonas	Group I	Otagovirus	Otagovirus	Gorskivirinae	Vandenendeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae pv. actinidiae	Complete	High-quality	100.000	DTR (high-confidence)	Otagovirus	Otagovirus psa267	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT670418	Pseudomonas phage phiPsa300	99272	47.682	Pseudomonas	Group I	Otagovirus	Otagovirus	Gorskivirinae	Vandenendeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae pv. actinidiae	Complete	High-quality	100.000	DTR (high-confidence)	Otagovirus	Otagovirus psa300	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT670419	Pseudomonas phage phiPsa315	98739	47.954	Pseudomonas	Group I	Otagovirus	Otagovirus	Gorskivirinae	Vandenendeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae pv. actinidiae	Complete	High-quality	100.000	DTR (high-confidence)	Otagovirus	Otagovirus psa315	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT670420	Pseudomonas phage phiPsa347	99689	47.702	Pseudomonas	Group I	Otagovirus	Otagovirus	Gorskivirinae	Vandenendeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae pv. actinidiae	Complete	High-quality	100.000	DTR (high-confidence)	Otagovirus	Otagovirus psa347	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT670421	Pseudomonas phage phiPsa381	98800	47.809	Pseudomonas	Group I	Otagovirus	Otagovirus	Gorskivirinae	Vandenendeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae pv. actinidiae	Complete	High-quality	100.000	DTR (high-confidence)	Otagovirus	Otagovirus psa381	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT670422	Pseudomonas phage phiPsa397	98951	47.725	Pseudomonas	Group I	Otagovirus	Otagovirus	Gorskivirinae	Vandenendeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae pv. actinidiae	Complete	High-quality	100.000	DTR (high-confidence)	Otagovirus	Otagovirus psa397	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT675124	Providencia phage vB_PreS-PibeRecoleta	60727	49.270	Providencia	Group I	Redjacvirus	Redjacvirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Providencia rettgeri B0142	High-quality	High-quality	100.000	AAI-based (high-confidence)	Redjacvirus	Redjacvirus piberecoleta	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT675125	Providencia phage vB_PreS-Stilesk	60924	49.470	Providencia	Group I	Redjacvirus	Redjacvirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Providencia rettgeri B0142	High-quality	High-quality	100.000	AAI-based (high-confidence)	Redjacvirus	Redjacvirus stilesk	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT675126	Providencia phage vB_PreS-PatoteraRojo	60728	49.420	Providencia	Group I	Redjacvirus	Redjacvirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Providencia rettgeri B0142	High-quality	High-quality	100.000	AAI-based (high-confidence)	Redjacvirus	Redjacvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT677933	Salmonella phage NBSal006	41850	49.795	Salmonella	Group I	Jerseyvirus	Jerseyvirus	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica AR 404	High-quality	High-quality	97.570	AAI-based (high-confidence)	Jerseyvirus	Jerseyvirus NBSal006	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic