INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MT498057	Microbacterium phage Cicada	42350	66.519	Microbacterium	Group I	Goodmanvirus	Goodmanvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224	High-quality	High-quality	100.000	AAI-based (high-confidence)	Goodmanvirus	Goodmanvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT498058	Gordonia phage Clawz	57664	64.949	Gordonia	Group I	Clawzvirus	Clawzvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia rubripertincta NRRL B-16540	High-quality	High-quality	100.000	AAI-based (high-confidence)	Clawzvirus	Clawzvirus clawz	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT498059	Gordonia phage Doggs	45384	66.352	Gordonia	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	99.710	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_36
MT498060	Mycobacterium Phage FiringLine	53348	63.524	Mycobacterium	Group I	Turbidovirus	Turbidovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	100.000	AAI-based (high-confidence)	Turbidovirus	Turbidovirus georgie2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_32;immunity orf_71
MT498061	Mycobacterium phage Jung	46561	67.078	Mycobacterium	Group I	Fishburnevirus	Fishburnevirus	Pclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	94.980	AAI-based (high-confidence)	Fishburnevirus	Fishburnevirus jung	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_30;immunity orf_31;antirepressor orf_34
MT498062	Microbacterium phage Leafus	42000	63.421	Microbacterium	Group I	Ilzatvirus	Ilzatvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium liquefaciens LMG 16120	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ilzatvirus	Ilzatvirus hamlet	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT498063	Microbacterium phage Mercedes	40230	63.271	Microbacterium	Group I	Neferthenavirus	Neferthenavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium liquefaciens LMG 16120	High-quality	High-quality	99.090	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
MT498064	Microbacterium phage Pabst	53620	58.995	Microbacterium	Group I	Tinytimothyvirus	Tinytimothyvirus	Eekayvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224	High-quality	High-quality	99.180	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
MT498065	Microbacterium phage PoRanda	17510	69.109	Microbacterium	Group I	Paopuvirus	Paopuvirus	Pelczarvirinae	Orlajensenviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224	High-quality	High-quality	100.000	AAI-based (high-confidence)	Paopuvirus	Paopuvirus poranda	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT498066	Mycobacterium phage Georgie2	53399	63.526	Mycobacterium	Group I	Turbidovirus	Turbidovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Turbidovirus	Turbidovirus georgie2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_32;immunity orf_71