INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MT460514 | Vibrio phage AG74 | 126504 | 40.172 | Vibrio | Group I | Thalassavirus | Thalassavirus | Ermolyevavirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio harveyi BAA-1116 | Complete | High-quality | 100.000 | DTR (high-confidence) | Thalassavirus | Thalassavirus AG74 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT460515 | Vibrio phage Cody | 126683 | 40.179 | Vibrio | Group I | Thalassavirus | Thalassavirus | Ermolyevavirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio harveyi BAA-1116 | Complete | High-quality | 100.000 | DTR (high-confidence) | Thalassavirus | Thalassavirus cody | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT460516 | Vibrio phage Quinn | 127684 | 40.094 | Vibrio | Group I | Thalassavirus | Thalassavirus | Ermolyevavirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio harveyi BAA-1116 | Complete | High-quality | 100.000 | DTR (high-confidence) | Thalassavirus | Thalassavirus quinn | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT460517 | Vibrio phage Athena | 127019 | 40.097 | Vibrio | Group I | Thalassavirus | Thalassavirus | Ermolyevavirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio harveyi BAA-1116 | Complete | High-quality | 100.000 | DTR (high-confidence) | Thalassavirus | Thalassavirus athena | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT460518 | Vibrio phage Direpillow8 | 129165 | 40.091 | Vibrio | Group I | Thalassavirus | Thalassavirus | Ermolyevavirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio harveyi BAA-1116 | Complete | High-quality | 100.000 | DTR (high-confidence) | Thalassavirus | Thalassavirus bennett | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT465573 | Escherichia phage P1723 | 40282 | 50.397 | Escherichia | Group I | Foetvirus | Foetvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli str. K-12 substr. MG1655 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Foetvirus | Foetvirus P1723 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT478991 | Escherichia phage vB_EcoM_011D4 | 163764 | 40.505 | Escherichia | Group I | Krischvirus | Krischvirus | Unclassified | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | Complete | High-quality | 100.000 | DTR (high-confidence) | Krischvirus | Krischvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT478992 | Escherichia phage vB_EcoS_011D2 | 50633 | 42.917 | Escherichia | Group I | Tlsvirus | Tlsvirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | Complete | High-quality | 100.000 | DTR (high-confidence) | Tlsvirus | Tlsvirus tv011D2 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_64 |
| MT478993 | Escherichia phage vB_EcoS_011D5 | 45204 | 54.491 | Escherichia | Group I | Dhillonvirus | Dhillonvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | Complete | High-quality | 100.000 | DTR (high-confidence) | Dhillonvirus | Dhillonvirus dv011D5 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT490303 | Prochlorococcus phage P-HS2 | 38327 | 37.157 | Prochlorococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Prochlorococcus marinus subsp. pastoris str. CCMP1986 | High-quality | High-quality | 98.690 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |