Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MT366948Bacillus phage Hyb3phi3Ts-SPbeta12742835.060BacillusGroup I SpbetavirusSpbetavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilis subsp. subtilis str. 168High-qualityHigh-quality99.580AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_28;integrase orf_83;antirepressor orf_97
MT374852Yersinia phage vB_YpM_33938751.733YersiniaGroup I MuvirusMuvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestis EV76-CNHigh-qualityHigh-quality100.000AAI-based (high-confidence) MuvirusMuvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT374853Yersinia phage vB_YpM_53722851.883YersiniaGroup I MuvirusMuvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestis EV76-CNHigh-qualityHigh-quality96.970AAI-based (high-confidence) MuvirusMuvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_10
MT374854Yersinia phage vB_YpM_63727751.879YersiniaGroup I MuvirusMuvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestis EV76-CNHigh-qualityHigh-quality97.060AAI-based (high-confidence) MuvirusMuvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_8
MT374855Yersinia phage vB_YpM_223180951.467YersiniaGroup I PeduovirusPeduovirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestis EV76-CNHigh-qualityHigh-quality99.470AAI-based (high-confidence) PeduovirusPeduovirus YPM22Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_33;immunity orf_34
MT374856Yersinia phage vB_YpM_233873251.787YersiniaGroup I MuvirusMuvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestis EV76-CNHigh-qualityHigh-quality100.000AAI-based (high-confidence) MuvirusMuvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT374857Yersinia phage vB_YpM_463233651.661YersiniaGroup I PeduovirusPeduovirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestis EV76-CNHigh-qualityHigh-quality100.000AAI-based (high-confidence) PeduovirusPeduovirus YPM46Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_30
MT374858Yersinia phage vB_YpM_503109652.126YersiniaGroup I PeduovirusPeduovirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestis EV76-CNHigh-qualityHigh-quality97.220AAI-based (high-confidence) PeduovirusPeduovirus YPM50Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_32
MT374859Yersinia phage vB_YpP_T33841947.240YersiniaGroup I BerlinvirusBerlinvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestis EV76-CNHigh-qualityHigh-quality96.190AAI-based (high-confidence) BerlinvirusBerlinvirus berlinCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT375042Acinetobacter phage vB_AbaP_Alexa4023749.067AcinetobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumannii NIPH 201High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_45
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