Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MT161385Xanthomonas phage FoX46041861.758XanthomonasGroup I FoxquatrovirusFoxquatrovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas campestris pv. campestris GBBC 1412High-qualityHigh-quality100.000AAI-based (high-confidence) FoxquatrovirusFoxquatrovirus fox4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT161386Xanthomonas phage FoX66107752.249XanthomonasGroup I CarpasinavirusCarpasinavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas campestris pv. campestris GBBC 1412High-qualityHigh-quality98.700AAI-based (high-confidence) CarpasinavirusCarpasinavirus FoX6Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT161387Xanthomonas phage FoX76101052.262XanthomonasGroup I CarpasinavirusCarpasinavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas campestris pv. campestris GBBC 1412High-qualityHigh-quality98.590AAI-based (high-confidence) CarpasinavirusCarpasinavirus FoX6Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT161459Aeromonas phage Ahp1_CNU-202121831747.944AeromonasGroup I StraboviridaeUnclassifiedUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Aeromonas hydrophilaHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MT162466Synechococcus phage S-N0316706950.053SynechococcusGroup I HuanghaivirusHuanghaivirusUnclassifiedKyanoviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. MW02CompleteHigh-quality100.000DTR (high-confidence) HuanghaivirusHuanghaivirus snothreeCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT162467Synechococcus phage S-H3416704050.076SynechococcusGroup I MakaravirusMakaravirusUnclassifiedKyanoviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. MW02High-qualityHigh-quality99.990AAI-based (high-confidence) MakaravirusMakaravirus thirtyfourCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT162468Synechococcus phage S-H2517365941.171SynechococcusGroup I TefnutvirusTefnutvirusUnclassifiedKyanoviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. WH 8102High-qualityHigh-quality99.510AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
MT176424Citrobacter phage PhiZZ616579535.432CitrobacterGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Citrobacter rodentium DBS100High-qualityHigh-quality98.610AAI-based (high-confidence) TequatrovirusTequatrovirus zeezeesixCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT176425Citrobacter phage PhiZZ2316751635.340CitrobacterGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Citrobacter rodentium DBS100High-qualityHigh-quality99.620AAI-based (high-confidence) TequatrovirusTequatrovirus zeezee23Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT176426Serratia phage PhiZZ3016748435.345SerratiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Serratia sp. ATCC 39006High-qualityHigh-quality99.620AAI-based (high-confidence) TequatrovirusTequatrovirus zeezeethirtyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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