INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MT074465 | Salmonella phage oselot | 113503 | 39.940 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Epseptimavirus | Epseptimavirus oselot | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MT074466 | Salmonella phage atrejo | 114059 | 39.971 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Epseptimavirus | Epseptimavirus atrejo | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MT074467 | Salmonella phage falkor | 114211 | 39.765 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Epseptimavirus | Epseptimavirus falkor | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MT074468 | Salmonella phage rutana | 114544 | 39.936 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Epseptimavirus | Epseptimavirus rutana | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MT074469 | Salmonella phage rabagast | 143249 | 44.529 | Salmonella | Group I | Kuttervirus | Kuttervirus | Cvivirinae | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 90.640 | AAI-based (high-confidence) | Kuttervirus | Kuttervirus rabagast | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT074470 | Salmonella phage heyday | 144232 | 44.470 | Salmonella | Group I | Kuttervirus | Kuttervirus | Cvivirinae | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 91.250 | AAI-based (high-confidence) | Kuttervirus | Kuttervirus heyday | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT074471 | Salmonella phage allotria | 151015 | 45.120 | Salmonella | Group I | Kuttervirus | Kuttervirus | Cvivirinae | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 95.580 | AAI-based (high-confidence) | Kuttervirus | Kuttervirus allotria | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT074472 | Salmonella phage bering | 156130 | 44.703 | Salmonella | Group I | Kuttervirus | Kuttervirus | Cvivirinae | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 98.790 | AAI-based (high-confidence) | Kuttervirus | Kuttervirus bering | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT074473 | Salmonella phage blauehaus | 41993 | 49.651 | Salmonella | Group I | Jerseyvirus | Jerseyvirus | Guernseyvirinae | Sarkviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 97.940 | AAI-based (high-confidence) | Jerseyvirus | Jerseyvirus blauehaus | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT074474 | Salmonella phage aagejoakim | 156801 | 44.491 | Salmonella | Group I | Kuttervirus | Kuttervirus | Cvivirinae | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis PT1 | High-quality | High-quality | 99.200 | AAI-based (high-confidence) | Kuttervirus | Kuttervirus aagejoakim | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |