Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Clear
Choose fields for download

37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MN890139Liberibacter phage pCLasGDDQ7869036.881LiberibacterGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Candidatus Liberibacter asiaticus str. GDDQ7Low-qualityGenome-fragment26.020HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
MN890140Liberibacter phage pCLasGDQY1869636.879LiberibacterGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Candidatus Liberibacter asiaticus str. GDQY1Low-qualityGenome-fragment26.040HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
MN890141Liberibacter phage pCLasGDXH1885136.776LiberibacterGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Candidatus Liberibacter asiaticus str. GDXH1Low-qualityGenome-fragment26.500HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
MN890142Liberibacter phage pCLasYNJS5888536.736LiberibacterGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Candidatus Liberibacter asiaticus str. YNJS5Low-qualityGenome-fragment26.600HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
MN890143Liberibacter phage pCLasYNJS47886936.791LiberibacterGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Candidatus Liberibacter asiaticus str. YNJS47Low-qualityGenome-fragment26.560HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
MN892483Microbacterium phage SonOfLevi4157363.363MicrobacteriumGroup I IlzatvirusIlzatvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224 SEAHigh-qualityHigh-quality100.000AAI-based (high-confidence) IlzatvirusIlzatvirus ilzatCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN892484Mycobacterium phage CactusJack4822267.285MycobacteriumGroup I FishburnevirusFishburnevirusPclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.430AAI-based (high-confidence) FishburnevirusFishburnevirus kilkorCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;immunity orf_32;antirepressor orf_35
MN892485Gordonia phage Kuwabara5410263.273GordoniaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_47
MN892486Mycobacterium phage KilKor4891667.209MycobacteriumGroup I FishburnevirusFishburnevirusPclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.850AAI-based (high-confidence) FishburnevirusFishburnevirus kilkorCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;immunity orf_32;antirepressor orf_35
MN892487Mycobacterium phage Mabel5257763.737MycobacteriumGroup I FromanvirusFromanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateparA orf_31;immunity orf_72
Previous Page 1265 of 3739 Next