INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Explore INPHARED2 data visually

Create interactive summaries of genome metadata and download the resulting figures.

Open graphs

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

Family (NCBI)

Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

Rows

Clear

Choose fields for download

37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MN850618	Escherichia phage tuntematon	150473	39.105	Escherichia	Group I	Phapecoctavirus	Phapecoctavirus	Stephanstirmvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	99.280	AAI-based (high-confidence)	Phapecoctavirus	Phapecoctavirus tuntematon	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850619	Escherichia phage finno	87544	38.935	Escherichia	Group I	Felixounavirus	Felixounavirus	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	99.430	AAI-based (high-confidence)	Felixounavirus	Felixounavirus finno	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850620	Escherichia phage atuna	50732	44.599	Escherichia	Group I	Warwickvirus	Warwickvirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	100.000	AAI-based (high-confidence)	Warwickvirus	Warwickvirus atuna	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850621	Escherichia phage dhabil	165644	39.465	Escherichia	Group I	Dhakavirus	Dhakavirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	97.200	AAI-based (high-confidence)	Dhakavirus	Dhakavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_152
MN850622	Escherichia phage mobillu	163063	37.681	Escherichia	Group I	Mosigvirus	Mosigvirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	96.080	AAI-based (high-confidence)	Mosigvirus	Mosigvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850623	Escherichia phage sortsyn	42116	59.011	Escherichia	Group I	Murrayvirus	Murrayvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	100.000	AAI-based (high-confidence)	Murrayvirus	Murrayvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MN850624	Escherichia phage usur	41906	55.414	Escherichia	Group I	Bonnellvirus	Bonnellvirus	Stentvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	99.500	AAI-based (high-confidence)	Bonnellvirus	Bonnellvirus usur	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850625	Escherichia phage smaasur	41110	55.410	Escherichia	Group I	Bonnellvirus	Bonnellvirus	Stentvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	97.660	AAI-based (high-confidence)	Bonnellvirus	Bonnellvirus smaasur	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850626	Escherichia phage nimi	137039	43.705	Escherichia	Group I	Vequintavirus	Vequintavirus	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	97.710	AAI-based (high-confidence)	Vequintavirus	Vequintavirus pangalan	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850627	Escherichia phage pangalan	136944	43.687	Escherichia	Group I	Vequintavirus	Vequintavirus	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	97.630	AAI-based (high-confidence)	Vequintavirus	Vequintavirus pangalan	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic