INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MN830258	Lactobacillus phage JNU_P9	41609	43.829	Lactobacillus	Group I	Sukhumvitvirus	Sukhumvitvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactobacillus paracasei	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30
MN830259	Lactobacillus phage JNU_P10	41955	45.065	Lactobacillus	Group I	Pleetrevirus	Pleetrevirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactobacillus paracasei	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_16;antirepressor orf_38
MN840485	Escherichia phage 2725-N35	45917	44.043	Escherichia	Group I	Veterinaerplatzvirus	Veterinaerplatzvirus	Braunvirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Eschericha coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Veterinaerplatzvirus	Veterinaerplatzvirus vv2725N25	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MN840486	Proteus phage P16-2532	58931	46.712	Proteus	Group I	Lavrentievavirus	Lavrentievavirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Proteus mirabilis	High-quality	High-quality	99.200	AAI-based (high-confidence)	Lavrentievavirus	Lavrentievavirus PM87	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN840487	Proteus phage 2207-N35	55645	35.892	Proteus	Group I	Gorganvirus	Gorganvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Proteus mirabilis	High-quality	High-quality	100.000	AAI-based (high-confidence)	Gorganvirus	Gorganvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN844877	Sphaerotilus phage vB_SnaP-R1	41507	62.474	Sphaerotilus	Group I	Natansvirus	Natansvirus	Unclassified	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Sphaerotilus natans DSM 6575	High-quality	High-quality	100.000	AAI-based (high-confidence)	Natansvirus	Natansvirus SnaPR1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850564	Escherichia phage humlepung	85311	39.081	Escherichia	Group I	Felixounavirus	Felixounavirus	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	96.880	AAI-based (high-confidence)	Felixounavirus	Felixounavirus humlepung	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850565	Escherichia phage ukendt	150947	39.025	Escherichia	Group I	Phapecoctavirus	Phapecoctavirus	Stephanstirmvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	99.600	AAI-based (high-confidence)	Phapecoctavirus	Phapecoctavirus ukendt	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850566	Escherichia phage garuso	85798	38.944	Escherichia	Group I	Felixounavirus	Felixounavirus	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	97.430	AAI-based (high-confidence)	Felixounavirus	Felixounavirus garuso	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN850567	Escherichia phage grams	49530	44.099	Escherichia	Group I	Hanrivervirus	Hanrivervirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	High-quality	High-quality	98.100	AAI-based (high-confidence)	Hanrivervirus	Hanrivervirus grams	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic