INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MN692672 | Pseudomonas phage vB_PaeP_Lx18 | 42735 | 62.162 | Pseudomonas | Group I | Phikmvvirus | Phikmvvirus | Krylovirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 99.220 | AAI-based (high-confidence) | Phikmvvirus | Phikmvvirus phiKMV | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN692673 | Salmonella phage VB_StyS_BS5 | 47604 | 45.526 | Salmonella | Group I | Skatevirus | Skatevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Skatevirus | Skatevirus BS5 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MN695334 | Synechococcus phage B3 | 244930 | 35.363 | Synechococcus | Group I | Kyanoviridae | Unclassified | Unclassified | Kyanoviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechoccus sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN695335 | Synechococcus phage B23 | 243633 | 35.393 | Synechococcus | Group I | Kyanoviridae | Unclassified | Unclassified | Kyanoviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechoccus sp. | High-quality | High-quality | 99.740 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN698239 | Pelagibacter phage HTVC023P | 60878 | 35.014 | Pelagibacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Candidatus Pelagibacter sp. HTCC1062 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN698240 | Pelagibacter phage HTVC026P | 32480 | 31.318 | Pelagibacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Candidatus Pelagibacter sp. HTCC1062 | High-quality | High-quality | 99.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN698241 | Pelagibacter phage HTVC027P | 57595 | 34.767 | Pelagibacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Candidatus Pelagibacter sp. HTCC1062 | High-quality | High-quality | 99.100 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN698242 | Pelagibacter phage HTVC103P | 54103 | 31.048 | Pelagibacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Candidatus Pelagibacter sp. HTCC7211 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN698243 | Pelagibacter phage HTVC104P | 54359 | 30.900 | Pelagibacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Candidatus Pelagibacter sp. HTCC7211 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN698244 | Pelagibacter phage HTVC106P | 36945 | 32.121 | Pelagibacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Candidatus Pelagibacter sp. HTCC7211 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |