INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MN586019	Mycobacterium phage Stark	74731	63.046	Mycobacterium	Group I	Kostyavirus	Kostyavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.150	AAI-based (high-confidence)	Kostyavirus	Kostyavirus CJW1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_52;immunity orf_55
MN586020	Microbacterium phage Megan	55210	69.641	Microbacterium	Group I	Meganvirus	Meganvirus	Unclassified	Hodgkinviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium paraoxydans NWU1	High-quality	High-quality	100.000	AAI-based (high-confidence)	Meganvirus	Meganvirus megan	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN586021	Arthrobacter phage Beagle	70671	65.720	Arthrobacter	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter globiformis NRRL B-2979 SEA	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
MN586022	Gordonia phage Chidiebere	91072	60.196	Gordonia	Group I	Chidieberevirus	Chidieberevirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia rubripertincta NRRL B-16540	High-quality	High-quality	100.000	AAI-based (high-confidence)	Chidieberevirus	Chidieberevirus chidiebere	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN586023	Mycobacterium phage Zaria	74365	58.737	Mycobacterium	Group I	Bronvirus	Bronvirus	Lclasvirinae	Vilmaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.350	AAI-based (high-confidence)	Bronvirus	Bronvirus bron	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_34
MN586024	Mycobacterium phage TyDawg	81039	61.618	Mycobacterium	Group I	Bongovirus	Bongovirus	Mclasvirinae	Vilmaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.150	AAI-based (high-confidence)	Bongovirus	Bongovirus bongo	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_105
MN586025	Mycobacterium phage Mdavu	56443	67.078	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	92.200	AAI-based (high-confidence)	Anayavirus	Anayavirus amelie	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_36;immunity orf_38
MN586026	Gordonia phage Leonard	59268	68.435	Gordonia	Group I	Leonardvirus	Leonardvirus	Schenleyvirinae	Stackebrandtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	99.940	AAI-based (high-confidence)	Leonardvirus	Leonardvirus leonard	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN586027	Arthrobacter phage Mufasa8	60205	66.136	Arthrobacter	Group I	Mufasoctovirus	Mufasoctovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter sp. ATCC 21022	High-quality	High-quality	100.000	AAI-based (high-confidence)	Mufasoctovirus	Mufasoctovirus mufasa8	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_27
MN586028	Gordonia phage MelBins	59761	68.337	Gordonia	Group I	Leonardvirus	Leonardvirus	Schenleyvirinae	Stackebrandtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	100.000	AAI-based (high-confidence)	Leonardvirus	Leonardvirus melbins	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic