INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MN509793	Pectobacterium phage MA13	42464	53.433	Pectobacterium	Group I	Daeravirus	Daeravirus	Melnykvirinae	Autonotataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium carotovorum	Complete	High-quality	100.000	DTR (high-confidence)	Daeravirus	Daeravirus MA13	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN510331	Escherichia phage vB_EcoP_PR_Kaz2018	39704	49.869	Escherichia	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	Complete	High-quality	100.000	DTR (high-confidence)	Kayfunavirus	Kayfunavirus K1F	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MN512538	Vibrio phage Seahorse	45171	42.591	Vibrio	Group I	Seahorsevirus	Seahorsevirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio parahaemolyticus VPAHPND	High-quality	High-quality	100.000	AAI-based (high-confidence)	Seahorsevirus	Seahorsevirus seahorse	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_54
MN516421	Acinetobacter phage Bphi-R2919	44227	37.767	Acinetobacter	Group I	Obolenskvirus	Obolenskvirus	Unclassified	Hirszfeldviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii YMC18/02/R2919	High-quality	High-quality	98.500	AAI-based (high-confidence)	Obolenskvirus	Obolenskvirus R2919	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MN516422	Acinetobacter phage Bphi-R1888	44590	37.874	Acinetobacter	Group I	Obolenskvirus	Obolenskvirus	Unclassified	Hirszfeldviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii YMC17/03/R1888	High-quality	High-quality	99.310	AAI-based (high-confidence)	Obolenskvirus	Obolenskvirus R1888	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MN518139	Pectobacterium phage MA11	55830	54.542	Pectobacterium	Group I	Newforgelanevirus	Newforgelanevirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium carotovorum	High-quality	High-quality	95.320	AAI-based (high-confidence)	Newforgelanevirus	Newforgelanevirus MA12	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN518893	Escherichia virus LS3	39255	49.899	Escherichia	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kayfunavirus	Kayfunavirus LS3	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MN518894	Escherichia virus LS2	39197	50.784	Escherichia	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	99.400	AAI-based (high-confidence)	Kayfunavirus	Kayfunavirus LS2	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MN524844	Bacillus phage vB_Bpu_PumA1	18466	34.285	Bacillus	Group I	Bundooravirus	Bundooravirus	Unclassified	Salasmaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus pumilus	Medium-quality	Genome-fragment	81.320	AAI-based (medium-confidence)	Bundooravirus	Bundooravirus PumA1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN524845	Bacillus phage vB_Bpu_PumA2	18932	35.802	Bacillus	Group I	Bundooravirus	Bundooravirus	Unclassified	Salasmaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus pumilus	High-quality	High-quality	90.640	AAI-based (medium-confidence)	Bundooravirus	Bundooravirus PumA2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic