INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MN270892	Pectobacterium phage Wc4-1	92039	44.703	Pectobacterium	Group I	Ounavirinae	Unclassified	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium carotovorum subsp. carotovorum	High-quality	High-quality	100.000	AAI-based (high-confidence)	Arnovirus	Arnovirus Wc4	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN271656	Pectobacterium phage MA2	41857	51.774	Pectobacterium	Group I	Kotilavirus	Kotilavirus	Corkvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium carotovorum subsp. carotovorum SR22	High-quality	High-quality	94.840	AAI-based (high-confidence)	Kotilavirus	Kotilavirus MA2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN276049	Acinetobacter phage BS46	94068	33.453	Acinetobacter	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii AC54	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
MN276192	Mycobacterium phage Trinitium	154512	64.665	Mycobacterium	Group I	Bixzunavirus	Bixzunavirus	Ceeclamvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	96.850	AAI-based (high-confidence)	Bixzunavirus	Bixzunavirus quasimodo	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN284892	Microbacterium phage Bradley2	17367	68.509	Microbacterium	Group I	Paopuvirus	Paopuvirus	Pelczarvirinae	Orlajensenviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224 SEA	High-quality	High-quality	99.810	AAI-based (high-confidence)	Paopuvirus	Paopuvirus paopu	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN284893	Mycobacterium phage LilMcDreamy	71552	69.347	Mycobacterium	Group I	Lilmcdreamyvirus	Lilmcdreamyvirus	Bclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Lilmcdreamyvirus	Lilmcdreamyvirus lilmcdreamy	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN284894	Streptomyces phage Fabian	46505	60.669	Streptomyces	Group I	Flowerpowervirus	Flowerpowervirus	Beephvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces scabiei RL-34	Complete	High-quality	100.000	DTR (high-confidence)	Flowerpowervirus	Flowerpowervirus flowerpower	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN284895	Mycobacterium phage Marshawn	61464	68.146	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Anayavirus	Anayavirus marshawn	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_41;immunity orf_43
MN284896	Gordonia phage OhMyWard	60978	52.153	Gordonia	Group I	Kenoshavirus	Kenoshavirus	Deejayvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia rubripertincta NRRL B-16540	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kenoshavirus	Kenoshavirus ohmyward	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_4
MN284897	Arthrobacter phage NapoleonB	57846	45.267	Arthrobacter	Group I	Mudcatvirus	Mudcatvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter sp. ATCC 21022	High-quality	High-quality	99.340	AAI-based (high-confidence)	Mudcatvirus	Mudcatvirus dynamite	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic