INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MN234188 | Mycobacterium phage Anthony | 52202 | 61.367 | Mycobacterium | Group I | Anthonyvirus | Anthonyvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Anthonyvirus | Anthonyvirus anthony | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_28;antirepressor orf_62 |
| MN234189 | Streptomyces phage Urza | 50448 | 68.528 | Streptomyces | Group I | Celiavirus | Celiavirus | Arquatrovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces griseofuscus ATCC 23916 | High-quality | High-quality | 99.980 | AAI-based (high-confidence) | Celiavirus | Celiavirus celia | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN234190 | Gordonia phage Gibbin | 67785 | 58.267 | Gordonia | Group I | Lambovirus | Lambovirus | Dovevirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia rubripertincta NRRL B-16540 SEA | High-quality | High-quality | 99.930 | AAI-based (high-confidence) | Lambovirus | Lambovirus gibbin | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN234191 | Microbacterium phage Naby | 17448 | 68.185 | Microbacterium | Group I | Bonaevitaevirus | Bonaevitaevirus | Pelczarvirinae | Orlajensenviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium paraoxydans NWU1 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Bonaevitaevirus | Bonaevitaevirus bonaevitae | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_22 |
| MN234192 | Streptomyces phage Animus | 50793 | 67.021 | Streptomyces | Group I | Janusvirus | Janusvirus | Arquatrovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces griseus ATCC 10137 | High-quality | High-quality | 99.920 | AAI-based (high-confidence) | Janusvirus | Janusvirus janus | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | immunity orf_29;integrase orf_50 |
| MN234193 | Mycobacterium phage Kboogie | 155680 | 64.695 | Mycobacterium | Group I | Bixzunavirus | Bixzunavirus | Ceeclamvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 97.580 | AAI-based (high-confidence) | Bixzunavirus | Bixzunavirus quasimodo | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN234194 | Arthrobacter phage Loretta | 56953 | 50.742 | Arthrobacter | Group I | Gordonvirus | Gordonvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Arthrobacter globiformis NRRL B-2979 SEA | High-quality | High-quality | 98.610 | AAI-based (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | lytic | |
| MN234195 | Mycobacterium phage Xula | 48540 | 66.745 | Mycobacterium | Group I | Brujitavirus | Brujitavirus | Chebruvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Brujitavirus | Brujitavirus xula | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_29;antirepressor orf_31 |
| MN234196 | Gordonia phage CloverMinnie | 61098 | 68.670 | Gordonia | Group I | Westmeadvirus | Westmeadvirus | Santaclaravirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 99.900 | AAI-based (high-confidence) | Mossrosevirus | Mossrosevirus mossrose | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MN234197 | Mycobacterium phage Ramen | 59462 | 66.589 | Mycobacterium | Group I | Anayavirus | Anayavirus | Weiservirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 97.150 | AAI-based (high-confidence) | Anayavirus | Anayavirus adephagia | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_40;immunity orf_42 |