INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MN183286 | Mycobacterium phage Yeet | 111437 | 60.818 | Mycobacterium | Group I | Omegavirus | Omegavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Omegavirus | Omegavirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_75;immunity orf_88 |
| MN184885 | Erwinia phage pEp_SNUABM_09 | 39848 | 52.166 | Erwinia | Group I | Snaubvirus | Snaubvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia pyrifoliae | High-quality | High-quality | 99.680 | AAI-based (high-confidence) | Snaubvirus | Snaubvirus pEpSNUABM09 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN184886 | Erwinia phage pEp_SNUABM_08 | 62716 | 57.244 | Erwinia | Group I | Gwanakrovirus | Gwanakrovirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia pyrifoliae | High-quality | High-quality | 99.990 | AAI-based (high-confidence) | Gwanakrovirus | Gwanakrovirus SNUABM08 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN184887 | Erwinia phage pEp_SNUABM_01 | 147321 | 48.706 | Erwinia | Group I | Henunavirus | Henunavirus | Vequintavirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia pyrifoliae | High-quality | High-quality | 99.560 | AAI-based (high-confidence) | Henunavirus | Henunavirus SNUABM01 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN187550 | Escherichia phage phiv142-3 | 39293 | 48.965 | Escherichia | Group I | Uetakevirus | Uetakevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli DE142 | High-quality | High-quality | 97.840 | AAI-based (high-confidence) | Uetakevirus | Uetakevirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | antirepressor orf_8 |
| MN187969 | Salmonella phage OSY-STA | 111039 | 40.048 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | High-quality | High-quality | 98.150 | AAI-based (high-confidence) | Epseptimavirus | Epseptimavirus OSYSTA | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MN191861 | Burkholderia phage AMP1 | 42798 | 61.751 | Burkholderia | Group I | Ampunavirus | Ampunavirus | Unclassified | Autonotataviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Burkholderia pseudomallei | Complete | High-quality | 100.000 | DTR (high-confidence) | Ampunavirus | Ampunavirus BpAMP1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_48 |
| MN197465 | Salmonella phage 2-3 | 114986 | 39.647 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Epseptimavirus | Epseptimavirus ev23 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MN200777 | Vibrio phage VAI2 | 6117 | 42.472 | Vibrio | Group II | Inoviridae | Unclassified | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Vibrio anguillarum T265 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | unknown | |
| MN200778 | Vibrio phage VAI1 | 6117 | 42.521 | Vibrio | Group II | Vasivirus | Vasivirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Vibrio anguillarum Ba35 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | unknown |