Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MN161573Salmonella phage HT105/1 int-2014172547.065SalmonellaGroup I LederbergvirusLederbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality100.000AAI-based (high-confidence) LederbergvirusLederbergvirus P22The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_18;antirepressor orf_19;integrase orf_23;integrase orf_39;cro orf_45;antirepressor orf_62;integrase orf_65
MN163280Klebsiella phage KpGranit12271045.216KlebsiellaGroup I SugarlandvirusSugarlandvirusUnclassifiedDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) SugarlandvirusSugarlandvirus KpGranitCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN163281Klebsiella phage KpCHEMY267067841.716KlebsiellaGroup I PylasvirusPylasvirusHumphriesvirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeCompleteHigh-quality100.000DTR (high-confidence) PylasvirusPylasvirus KpCHEMY26Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN164484Escherichia virus ECH14605443.558EscherichiaGroup I GuelphvirusGuelphvirusBraunvirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) GuelphvirusGuelphvirus ACGM12The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MN166083Acinetobacter phage Abp94482037.691AcinetobacterGroup I SichuanvirusSichuanvirusUnclassifiedHirszfeldviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.590AAI-based (high-confidence) SichuanvirusSichuanvirus Abp9The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MN166823Klebsiella phage ST512-KPC3phi13.52562451.998KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae ST512-KPC3Medium-qualityGenome-fragment64.140AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperatecro orf_25;integrase orf_40
MN172529Listeria phage LP-03913623435.914ListeriaGroup I PecentumvirusPecentumvirusJasinskavirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Listeria monocytogenes MACKCompleteHigh-quality100.000DTR (high-confidence) PecentumvirusPecentumvirus LP048Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN175603Microbacterium phage Tyrumbra5397568.663MicrobacteriumGroup I MetamorphoovirusMetamorphoovirusUnclassifiedHodgkinviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium paraoxydans NRRL B-14843High-qualityHigh-quality100.000AAI-based (high-confidence) MetamorphoovirusMetamorphoovirus tyrumbaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN175604Gordonia phage PhorbesPhlower4148665.080GordoniaGroup I LuckytenvirusLuckytenvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality98.720AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_31;antirepressor orf_41
MN175679Vibrio phage vB_VpS_BA35864846.300VibrioGroup I QueuovirinaeUnclassifiedQueuovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticus O1-1Medium-qualityGenome-fragment55.730AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
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