Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MN096376Mycobacterium phage Lucyedi5298761.449MycobacteriumGroup I EagleeyevirusEagleeyevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) EagleeyevirusEagleeyevirus eagleeyeThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateparA orf_33;immunity orf_70
MN096377Mycobacterium phage Finnry7563259.294MycobacteriumGroup I LumosvirusLumosvirusLclasvirinaeVilmaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.950AAI-based (high-confidence) LumosvirusLumosvirus lumosCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_36;immunity orf_38
MN096378Microbacterium phage MCubed4038162.032MicrobacteriumGroup I ElerivirusElerivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224 SEAHigh-qualityHigh-quality99.140AAI-based (high-confidence) ElerivirusElerivirus eleriCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN096379Streptomyces phage Yasdnil5163165.699StreptomycesGroup I LikavirusLikavirusArquatrovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces griseus ATCC 10137High-qualityHigh-quality100.000AAI-based (high-confidence) LikavirusLikavirus yasdnilCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateimmunity orf_27;integrase orf_46
MN096380Mycobacterium phage Lewan7673459.038MycobacteriumGroup I FaithunavirusFaithunavirusLclasvirinaeVilmaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) FaithunavirusFaithunavirus faith1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_39;immunity orf_41;cro orf_42
MN096381Streptomyces phage Rusticus5006665.927StreptomycesGroup I LikavirusLikavirusArquatrovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces tricolor NRRL B-16925High-qualityHigh-quality98.760AAI-based (high-confidence) LikavirusLikavirus izzyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateimmunity orf_28;integrase orf_46
MN096382Mycobacterium phage AvadaKedavra7372158.713MycobacteriumGroup I BronvirusBronvirusLclasvirinaeVilmaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.500AAI-based (high-confidence) BronvirusBronvirus bronCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_34;antirepressor orf_56
MN098325Rosenblumvirus portland1771129.293UnspecifiedGroup I RosenblumvirusRosenblumvirusRakietenvirinaeRountreeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality100.000AAI-based (high-confidence) RosenblumvirusRosenblumvirus portlandCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN098326Proteus phage Myduc5339239.274ProteusGroup I MyducvirusMyducvirusCleopatravirinaeChaseviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Proteus mirabilisHigh-qualityHigh-quality100.000AAI-based (high-confidence) MyducvirusMyducvirus myducCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN098327Klebsiella phage Mulock4372752.636KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality97.030AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_29;cro orf_42
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