Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MK972711Salmonella phage SW93112353.006SalmonellaGroup I EganvirusEganvirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality98.290AAI-based (high-confidence) EganvirusEganvirus SW9Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_27
MK972712Salmonella phage SI73016454.363SalmonellaGroup I IrrigatiovirusIrrigatiovirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.CompleteHigh-quality100.000DTR (high-confidence) IrrigatiovirusIrrigatiovirus SI7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_24
MK972713Salmonella phage SW53004654.357SalmonellaGroup I IrrigatiovirusIrrigatiovirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality100.000AAI-based (high-confidence) IrrigatiovirusIrrigatiovirus SI7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1
MK972714Salmonella phage SW33003754.353SalmonellaGroup I IrrigatiovirusIrrigatiovirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality100.000AAI-based (high-confidence) IrrigatiovirusIrrigatiovirus SI7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1
MK972715Salmonella phage SE1110776339.195SalmonellaGroup I TequintavirusTequintavirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality95.350AAI-based (high-confidence) TequintavirusTequintavirus SE11The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MK972716Salmonella phage SE810776339.196SalmonellaGroup I TequintavirusTequintavirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality95.350AAI-based (high-confidence) TequintavirusTequintavirus SE11The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MK972717Salmonella phage SE1811079540.095SalmonellaGroup I EpseptimavirusEpseptimavirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.CompleteHigh-quality100.000DTR (high-confidence) EpseptimavirusEpseptimavirus S116The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MK972831Shigella phage Sfin-25039045.213ShigellaGroup I TunavirusTunavirusTunavirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella sp.High-qualityHigh-quality100.000AAI-based (high-confidence) TunavirusTunavirus Sfin1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK976036Wolbachia phage WO1722336.654WolbachiaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Wolbachia sp. wRi_KLLow-qualityGenome-fragment37.980AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MK977694Escherichia phage vB_EcoM-Sa45lw16735335.350EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli ATCC 13706High-qualityHigh-quality99.490AAI-based (high-confidence) TequatrovirusTequatrovirus vtecCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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