INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
MK894434	Microbacterium phage LaviMo	17453	68.733	Microbacterium	Group I	Paopuvirus	Paopuvirus	Pelczarvirinae	Orlajensenviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224 SEA	High-quality	High-quality	100.000	AAI-based (high-confidence)	Paopuvirus	Paopuvirus Scamander	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK894435	Microbacterium phage Alex44	54396	59.949	Microbacterium	Group I	Tinytimothyvirus	Tinytimothyvirus	Eekayvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224 SEA	High-quality	High-quality	100.000	AAI-based (high-confidence)	Tinytimothyvirus	Tinytimothyvirus alex44	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MK894436	Gordonia phage Boopy	114220	53.212	Gordonia	Group I	Forzavirus	Forzavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	Complete	High-quality	100.000	DTR (high-confidence)	Forzavirus	Forzavirus forza	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK894437	Microbacterium phage MonChoix	41670	63.365	Microbacterium	Group I	Ilzatvirus	Ilzatvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224 SEA	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ilzatvirus	Ilzatvirus monchoix	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK894438	Microbacterium phage LilyLou	54388	59.995	Microbacterium	Group I	Tinytimothyvirus	Tinytimothyvirus	Eekayvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum	High-quality	High-quality	100.000	AAI-based (high-confidence)	Tinytimothyvirus	Tinytimothyvirus alex44	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MK895508	Vibrio phage Brizo	120106	40.128	Vibrio	Group I	Thalassavirus	Thalassavirus	Ermolyevavirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio campbellii ATCC BAA-1116	Complete	High-quality	100.000	DTR (high-confidence)	Thalassavirus	Thalassavirus brizo	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK903033	Staphylococcus phage SA44-CTH7	17522	28.867	Staphylococcus	Group I	Rosenblumvirus	Rosenblumvirus	Rakietenvirinae	Rountreeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus	High-quality	High-quality	99.060	AAI-based (high-confidence)	Rosenblumvirus	Rosenblumvirus SA46CL1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK903277	Escherichia phage Pisces	39497	53.207	Escherichia	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	99.280	AAI-based (high-confidence)	Kayfunavirus	Kayfunavirus pisces	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MK903278	Xanthomonas phage Pagan	44448	62.331	Xanthomonas	Group I	Pradovirus	Pradovirus	Gujervirinae	Autonotataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas sp.	High-quality	High-quality	99.940	AAI-based (high-confidence)	Pradovirus	Pradovirus pagan	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK903279	Escherichia phage Peacock	39233	50.149	Escherichia	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	98.630	AAI-based (high-confidence)	Kayfunavirus	Kayfunavirus peacock	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic